Cyclopterus lumpus (lumpfish): 117727537
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Entry
117727537 CDS
T09199
Name
(RefSeq) protein SOGA3-like
KO
K27704
microtubule cross-linking factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117727537
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117727537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
APG6_N
Cnn_1N
TSC22
Motif
Other DBs
NCBI-GeneID:
117727537
NCBI-ProteinID:
XP_034383791
Ensembl:
ENSCLMG00005022218
LinkDB
All DBs
Position
24:complement(6058227..6062835)
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AA seq
871 aa
AA seq
DB search
MKPAASGAADPPSPSTASADNSAGRRRQHRAPSPATAQEGATKRAPRHPGRSRSPLPAGK
SRHGDSLRSADGREREPESRGGAAVHPDGAEADVVGPNRADAVGEEPTDSSAAARRSALR
LPCLKGDSPHCLLPGTASPPSAEKGRKPGEEGGRRERRRRRGCGAGLGLGLWRGGCLQAE
LIQFHLQKRLRKSGAKMQTMADNMGTEEAALGESEPAAEAVEAGSVTQQEDQAFEDEMER
LLDENEDLKCEIEEMRTEMDEMRDTFYEEDTCQLQEMRRELERANKNCRILQYRLRKAER
KRLRYAQTGEIDEELLRSLEQDLKVAKDVSVRLHHELEKVEEKRTKTEEENEKLRQKLIE
VEVTKQALQNELEKTKESQKRRGSKDIQKTDRKLAQTPTEEDNEDLKCQLAFIKEEAVLM
RKKTAKIDKEKDRLEQELQKYRSFYGELDSTHHKGEAGGPPTTRESELKLRLRLVEEEAN
ILGRKIVELEVENRGLRAELDDLRGDAEGDGCGASGGSGRGLGDDVTELRQQLQLVEDEA
ELLRRNLADVEDQNKKVTTELNKLRFKASTHEGSGRHGGGAGGGGIDGAKAEALQEELKA
ARLQINDLSGKVMQLQYENRVLLSNMQRYDLASHLSLRPSPRDSDAESDAGGAASGRRES
DEDSNSSRLLPPHRKREGPVGGESDSDEVRNNNGGSRCLTPTRGLYTPTGPEGGGGGASS
ALARFLPGGRCSLRERQHMTDIRAEAERLVRTIDRLIADTATIISEARVFVSNGDLMFGR
GGEEGGEEDGGRIREHELLYRINAQMKAFRKELQTFIDRLEVPRLEDRDAEEPLSMFQPI
ILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggccgccagcggcgctgcagatcctccatcaccgtcaacagcgtcggcagac
aatagcgcagggaggaggaggcagcaccgggctccctcgccggctacagcccaggaaggg
gcaaccaagcgagctccaagacacccaggcaggtccaggtctcctcttcccgcaggaaaa
agccgacacggggacagtttgaggtccgcagacggaagggagagggagcccgagagccgc
ggcggcgcagctgttcacccggatggtgctgaagctgatgtagtcggaccaaacagggcg
gatgctgtcggggaagagccgacagattcatcagcagcggcccgtcgctccgctttgcgc
ctgccctgcctcaaaggcgactccccccactgtctgttgcccggcacagcttcgcctccg
tcggcagagaaagggaggaaacccggcgaggaaggaggccgtcgggagaggaggcggagg
aggggctgcggcgcgggcctcggtttgggtttgtggaggggaggatgcttgcaggctgaa
ctcatccagttccacctgcagaagagactgagaaaaagcggggcgaagatgcaaaccatg
gcggacaacatggggacagaggaggccgccctgggagagtcggagccggctgcggaggcg
gtagaggcggggtccgtgacacagcaggaggaccaggcctttgaagacgagatggagaga
ctgctggacgaaaacgaagatcttaagtgtgaaattgaggagatgaggaccgagatggac
gagatgcgggacaccttctacgaggaagacacgtgtcagctgcaggagatgaggcgtgag
ctggagagggccaataaaaactgccggatcctgcagtaccgtctgaggaaggccgagagg
aagaggctgcgctacgcccagacgggggagatcgatgaggagctgctcaggagtctggag
caggacctgaaggtggcgaaggatgtgtccgtgaggctgcaccacgagctggaaaaggtg
gaggagaagcgcacgaagacggaggaggagaatgaaaagctgaggcagaaactcatcgag
gtcgaagtgaccaaacaagccctgcagaatgaactagaaaaaaccaaagagtctcaaaag
agaagaggaagcaaggacatccagaagaccgacaggaaattagcacagactcctacagag
gaggacaacgaggacctcaagtgccagctagctttcatcaaagaggaagcggtgctcatg
agaaagaagacggccaagattgacaaagagaaggaccgtctggagcaagagctgcagaag
taccgctccttctacggtgagctggacagcacccatcataaaggagaggccgggggtccg
cccaccacccgggagtctgagctgaagctccggctccgcctggttgaggaggaggccaac
atcctggggagaaaaatagtggagttggaggttgagaaccggggcctgagggccgagctc
gacgacctccgcggggacgccgagggtgacgggtgcggcgcgtcgggtggctcggggcga
ggcctcggagacgatgtgacggagctccgacagcagctgcagctggtggaggatgaggcg
gagctgctgaggaggaacctggctgacgttgaagatcaaaacaagaaagtgaccactgag
ctgaacaagctacggttcaaagccagcacccacgaggggagcggcaggcacgggggcgga
gcgggaggtggagggatcgacggagcgaaggcggaagccctgcaggaggagttaaaggca
gcgaggctacagattaatgacctaagtggcaaggtgatgcagctgcagtacgagaaccgc
gtgctcctctccaacatgcagcgctacgacctggcctcccacctctccctgcggcccagc
ccgcgggacagcgacgcagagagcgatgccggcggcgcggcgagcggtcgccgggagagc
gacgaggactccaattcctcccgcctcctcccaccccaccgcaaacgcgagggccccgtg
ggtggcgagagcgactcggatgaggtcagaaacaataacggcggcagccgctgcctgacg
cccacgcggggcctctacacccccactgggcccgagggcggcggcggcggcgcctcctcc
gccttggcccgcttcctgcccggcggccggtgcagcctgcgcgaaaggcagcacatgacc
gacatccgcgccgaggcggagaggctcgtccggaccatcgaccggctcatcgccgacacg
gccaccatcatctcggaggcgagggtcttcgtttcgaacggcgacctgatgttcgggagg
ggaggggaggagggcggagaggaagacgggggcaggattagggaacacgagctgctgtat
cgcattaacgcccagatgaaggccttccgcaaagaactgcagaccttcatagacagactg
gaggtgccgaggctcgaggaccgggacgcggaggagccactgtcgatgttccagcctatc
attttgctcatcctcatactcgtgttattctcatccctctcttacgccaccatctttaaa
ctagtctttctttttactcttttctttgttctgtga
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