Cyclopterus lumpus (lumpfish): 117727587
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Entry
117727587 CDS
T09199
Symbol
lrp3
Name
(RefSeq) low-density lipoprotein receptor-related protein 3 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117727587 (lrp3)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117727587 (lrp3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
117727587
NCBI-ProteinID:
XP_034383863
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Position
3:6558307..6566552
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AA seq
837 aa
AA seq
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MMAASPRRTVAPTELLLGLLWFRSALLGAAGCSERVEVHTERRGVLYSPSWPLNYPPGVN
CSWHIQGGQGEVITISFRNFDMAESGSCLGDWLLLTPTRNGESRLCGSMLPPPFISTRGR
VWLYFHSRANSSGQAQGFRLSYIRGHLGQSSCQSDEFLCGNGKCLPRSWKCNGQDECGDA
TDERSCSPPPTEARPGLCPLGSLACTEAQSTRCLPAALRCNGARDCADGADELGCPDTAC
GKRLGNFYGSFASPDFFRANRSAVVELRCSWSLDTQDPKPIVLQLDLQLGPRDSLHVYDG
LLQRAEHLLQVLSYHNNRRPALLESSRGQMSVLYMAQPHSPGHGFNATYQVKGYCFPGER
PCGSDQGCYTERQRCDGYWHCPSGRDEEACPACPGGEFPCEGGAGVCYPASERCNNQKRC
PDGSDEKNCYDCQPGNFHCGTNLCIFETWRCDGQEDCLDGSDERDCLAAVPRKVITAALI
GSLVCSLLLVIALGCALKLHSLRNREYRAFETQMTRMEAEFVQREAPPSYGQLIAQGLIP
PVEDFPVYNPTQASVLQNLRLAMRRQIRRHSTRRSASSSSRRRLGHLWSRLFPGPGRTRG
HAPLLDSPGPAQIALGLHSYRTVGVQGPQARARSGAWLENEVDAVGSCCSATMDLQSCTP
ESPASPLSSLSVDSPEEGALSPFSREHSGATQSEPLTPFQSDCLECSGPPPAPQEASEPP
CPTKASRKLVLELAVNLKGVSLRRYSPLGPLSPISPPVFPSCSQTPTALLLSQGLEVTSP
FEPSKAEDSNSHFTAEVPSREIRSRDERRSDVKRRLPRFSRTLSDEGGVSGRETTPC
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcgagtccccgccggaccgtggccccgacggagctgctgctcgggctgctg
tggttccgctccgcgctgctcggcgcagcaggctgcagtgagcgagtggaggtccacaca
gagcggaggggtgtgctctacagcccctcgtggcctttaaactacccccccggagtgaac
tgcagctggcacatccagggaggtcagggagaggtcattaccatcagtttccgtaacttt
gacatggcggagtcggggagttgtttgggagactggctcctgctgacacccacgaggaac
ggggagtccaggctgtgtggctccatgctgcctccgcccttcatctccaccagggggcgc
gtttggctctatttccactctcgggccaacagctccgggcaggcccagggctttcgtctc
tcctacatcagaggtcacttgggtcagagcagctgtcagtccgatgaattcctgtgtggg
aacgggaagtgtcttcctcgctcctggaagtgcaacggtcaggacgagtgcggcgatgcc
acggacgaacgcagctgctccccccctcccaccgaggcccgtcccggcctctgccccctc
ggctccctcgcgtgcaccgaggcccagtccacccgctgcctgcctgccgccctgcgctgc
aacggagcccgggactgtgccgacggcgcagacgagctgggctgccccgacaccgcctgc
ggcaagcgcctgggcaacttctacggctcttttgcgtccccggatttcttccgggccaac
aggagcgccgtagtggagctgaggtgctcgtggtcgctggacacccaggaccccaagccc
atcgtgctgcagctggacctgcagctggggcccagggactcgctgcacgtctacgacggc
ctgctgcagcgggcagagcacctcttacaggtgctgtcgtatcataacaacaggcggccg
gcgctgctcgagtccagtcggggtcagatgagtgttttgtacatggcccagcctcacagc
ccggggcatggcttcaacgccacataccaggtcaaaggttactgttttcccggcgagcgt
ccctgtggcagcgatcagggctgctacaccgagcgccagcgctgcgacggctactggcac
tgcccatccggccgcgacgaggaggcctgcccggcgtgccccggcggggagttcccctgc
gaggggggcgccggcgtctgctacccagcctccgagcgctgcaacaaccagaagaggtgc
ccggatggctcggacgagaagaactgctacgactgccaacctggaaacttccactgcggg
acgaacctgtgcatctttgagacgtggcgctgtgacggccaggaggactgcttggacggg
agcgacgagagggactgcttggcagcggtgcccaggaaagtgatcacggccgcactgatc
ggcagtctggtctgcagtctcctgctggtcattgccctcggctgtgccctcaaactccac
tccctcaggaacagagaatacagagcgtttgagactcagatgactcgcatggaggcagag
tttgtccagagggaggcccccccttcgtatggtcagttaatcgcccagggtctcatccct
ccggtggaggatttcccggtgtacaaccccactcaggcctccgtgttacagaacctgcgg
ctggcgatgcgcaggcagatcagacgtcactcaacgcggcgctccgcctcctcgtcctct
cgccgccgcctcgggcatctgtggagtcgcctcttccccggtccagggcgaaccagaggc
cacgcccccctgctcgactcccccggacccgcgcagatcgcactggggctccacagctac
cgaactgtgggtgtgcaggggccccaggcaagggctaggtccggagcttggctcgagaat
gaggttgatgcggtgggctcctgctgctcagcaaccatggacctgcagtcctgcacgcca
gagagccccgcatcaccgctctcctcgctgtcagtagacagcccagaggagggggcgctg
tcgcctttcagcagggaacacagcggggcgacacagtctgagcccctcaccccttttcag
agtgactgtttagaatgtagcggaccccctcccgctccccaggaagcctctgaaccccca
tgccctacaaaggcatctcggaaactggtcctggagctcgctgtgaacctaaaaggtgtt
tccttgagacgctactcccccttggggccgttgtcccccatctcaccccctgtgtttccc
agctgctcccagacacccacagccctactgctctcccaggggttagaggtgacttcacct
tttgagccctcgaaagcagaggacagcaacagccacttcaccgcggaagtgccgagcagg
gaaataagaagcagggatgagaggaggagtgacgtcaagaggaggctccccaggttcagc
aggaccctcagcgacgagggaggggtttcagggagggagacgacgccgtgctga
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