KEGG   Cyclopterus lumpus (lumpfish): 117727648
Entry
117727648         CDS       T09199                                 
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117727648 (stxbp5a)
Membrane trafficking [BR:clum04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    117727648 (stxbp5a)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    117727648 (stxbp5a)
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR5 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Lgl_C EIF3I Beta-prop_RSE1_2nd Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_WDR36-Utp21_2nd Beta-prop_Vps41 Synaptobrevin CFAP43_N VPS8_N Beta-prop_WDR35_TULP_N WDR54
Other DBs
NCBI-GeneID: 117727648
NCBI-ProteinID: XP_034383947
Ensembl: ENSCLMG00005014023
LinkDB
Position
24:complement(9258660..9337764)
AA seq 1106 aa
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQNGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFSKERITFCHLPFQSKWLYIGTERGNIHLVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADCRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
IGEPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYANDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDCGGGEQTSALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVRST
PLKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYVQKTVVLN
LGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLLSVCPPRGA
NPLDHRDNSFSRSRSSSVTSIDKEAREAISSFHFSETFARKGDSTLTPCLYVGTTLGTVL
ALALTLPPAGEQRQLQPVIISPTGMLVRLKGSIMRMAYLDSTGAMLPPAFEPWFEPNVTA
DGEEREKVRKRRPVSVSPSTSQDLNESQYAVVCSEKQAKVISLPSQTCIYKHSITETSFI
LRADVVQMSQGVCLACFCANGHIMTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAM
YLCSPTEAQRLTYSQDTCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELF
GEISSGKASRSLAQHIPGPGGIEGMKGAASGVVGDLARARIALDERGQKLGELDEKTAAM
MASADYFSKHAHEMMLKCKDKKWYQF
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggtatcctcctccacc
ccgtctgtccaagtggggccacaggagaaccatctgatccaggagaccctccagtccgag
catttccagctctgcaagactgtccgtcatggcttcccctaccagccgtcgtccatggct
ttcgaccctgtgcagaagatactggccatcggcacccagaatggagctctcagattgttt
ggtcgtccaggcgtggagtgttactgtcagcatgagagtggagcggccgtcatccagctc
cagtttctcatcaatgagggagcgctggtgagcgccctggctgacgacagtgttcacctg
tggaacctgaggcagaagagaccagccatcctccactccctcaagttcagcaaagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgaggg
aacatccacctcgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcaccctggaccagttgtgcacataagtgacaac
cccatggatgagggaaagcttataattggatacgagtctgggatcgtggtcctatgggat
ctgaaatcaaagaaggccgactgtcgctacacttacgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatgg
aacatcagaggccagggcaagcccatacagacaatcaccccacacggaaaacagcccaag
gacgggaagaagccagagccttgtaaacccattctcaaagtggagtacaaaaccaccaga
attggggagcccttcatgatcctgtccggaggtctgtcctacgacacggtaggacggcgt
ccatgtctgactgtaatgcacgggaagagcaccgccgtgctggagatggactatccaata
gtggacttcctcacactctgtgagacaccatacgctaacgattttcaggaaccttacgct
gtggtggtccttctggaaaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgagaacccctaccctctgactatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactccgtcggctctcggcagaaa
cgacagggctacagcaaaaaggaatggcctattagtggtggaaactggggtcaaggcaca
cagagctacccagagatcatcatcactgggcatgctgatggaaccgtgaagttctgggat
gcctctgcaataatgctccaggtgctttataagctcaaaacagccaaggtgtttgacaga
aaccggtccaaggaggacaaaggcagcaccgaggtgtcagatgaagacccctttgccatt
caaatcatggcctggtgccctgaaagccgaatgttgtgtgtggccggggtgtcagccaac
gttatcatctaccgcttcagcaaactggaagtaactactgaggtggtgcagttactagag
gtgcggatgcagtacgagctgaacgacatcgagtctccagactgcggagggggagaacag
acatcggcgcttcccacccccggtgcctcccctcagacgagcggcccaccttcacacccc
tccaccagcagcaacaactctgacggaggcaacatgccctgcctcaaagtgcgcagtacc
cctctgaagcagtctgcaggttaccaggtagatttggtggtccagttagtgtgggtgagc
ggagagcctccgcagcagatcacaagtctggcgctcaattcctcctacggccttgtggtg
tttggcaacagtaacggtctggcagtggtggactacgtccagaagacggtggtgctcaac
ctggggacggtggagctctacggctccaatgacccctaccagagacagccccgctcgcca
aggaagacacgacagccctctggaggtctgtgcgacatcaacgagggctcagccacatca
gaggaccgctgcaagtcccctacttcagtcctcctgtctgtatgcccgccgcggggtgcc
aacccattagaccaccgggacaattctttcagccgctcacgctcctccagcgtcaccagt
atcgacaaggaagcacgagaggccatcagctccttccacttcagtgagacctttgcccgg
aagggggatagcactttgacaccctgcctgtacgtgggcaccactctgggcacggtgctt
gctctagcgctcacattgccccctgctggggagcaacggcaactgcagccagttatcatt
tcaccgacaggcatgctggtgcggctgaagggcagcatcatgcggatggcttacctggat
tctacaggtgccatgctgccccctgcctttgagccttggtttgagcccaacgtgacagca
gatggtgaagaaagggagaaggtccgtaagcgccggcccgtctcagtgtccccttccacc
tcccaggacctcaacgagagccagtacgccgtggtgtgttcggagaaacaggccaaagtc
atttccctcccgtcccagacctgcatctataaacacagtatcacagagacctcctttatc
ctacgggcagatgtggtgcagatgagccaaggcgtgtgtctggcgtgtttctgcgccaat
ggccacatcatgaccctcagtgtgccgggactgagaccgctcatggatgtaaactacctg
cctttgacagacatgcggatagcaaggacgttctgcttcaccaacctgggtcaggccatg
tacctctgctcccccactgaggcccagaggctcacttacagccaggacacctgtgaaaac
ctgcaggagatgctgggggaactttttacaccagtggagacaccagaggctcccaacaga
gggttcttcaaaggcctctttgggggaggagcacagtcactggacagagaggagctattt
ggtgagatatcatctggaaaggcatcccgaagtttggcccagcacatcccaggcccgggt
ggcatcgagggcatgaagggagcggcgtctggtgtcgttggagatctggcacgcgcccga
atagcactggatgaaagaggccagaaactgggcgagctcgatgagaagacagctgccatg
atggccagcgcagactacttttccaaacacgcccatgagatgatgctgaagtgcaaagac
aaaaaatggtaccagttctga

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