Cyclopterus lumpus (lumpfish): 117727663
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Entry
117727663 CDS
T09199
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03410
Base excision repair
clum04210
Apoptosis
clum04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117727663 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117727663 (parp1)
04217 Necroptosis
117727663 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117727663 (parp1)
03036 Chromosome and associated proteins [BR:
clum03036
]
117727663 (parp1)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117727663 (parp1)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
117727663 (parp1)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117727663 (parp1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117727663 (parp1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117727663 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
117727663
NCBI-ProteinID:
XP_034383970
Ensembl:
ENSCLMG00005010833
UniProt:
A0A8C2XTK1
LinkDB
All DBs
Position
24:8446047..8456586
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSHEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADISGYSDLRWEDQEKVQKAIENGGATGGKGDQKSGATGQKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKSVDAEKPQLGLIDRWYHTACFVSRREELVFKPEYNAAQ
LKGFNALRAEDKEELKKRLPVVKTEGKRTTDEVDGASKKQKKEEEDEKKKLDEQLKNQSQ
LIWGIKDKLKKFCSTNDMKELLIANGQEVPSGESNVVDCLADGMAFGALEACTECKGQVV
FKGDAYYCTGDISAWTKCVYKTTTPIRRDWVTPKEFHEVPFLKKFKFKRQDKVYPKEAPT
QTLTKVKAEPLASASSAPTERLPEGAPADKPLTGMKLLTVGKLSKNKDDLKTAVEEMGGK
ISTTANKASLCLSTKKEVEKMSKKMEEARDAGVRVVSEDFLTDIKSSGKALQELVSLHAI
SPWGAEVKVEAQASSVASKSGALATKSTGRVKEEEGGSKSKKMKLTVKGGAAVDPDSGLE
NSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFNDKNSAQDNFLGVYKEKTGNIWSCSNFTKYPNKFYPLEIDYGQDEEAVKRLTASAG
TKSKLAKPIQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQQAV
SDSQAEAQILDLSNRFYTLIPHDFGMKKPPLLNSLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNESDPIDINYEKLKTKIEVVDKNTDEAEIIMQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRFRPFEELHNRQLLWHGSRATNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPAGLLLLAEVALGNMHELKKASHISKLPKGKHSVKGLGRSAPDPSA
SVTLDGVQVPLGKGANTNIDDTSLLYNEYIVYDVAQINMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcatgaggacaagctgtacaaagcggaatatgccaaaagcggccgcgca
tcgtgcaagaaatgcaaggaaaacatagcgaaagactcgctgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttctcttgcttctggctg
cgagcagcagctcagtcgactgcagatatttctgggtattctgacctccgctgggaggac
caggagaaggtccaaaaggccattgaaaatgggggagcaacaggaggaaaaggggaccag
aagagtggcgctacaggacagaagacactgaatgactttgcggttgaatatgccaagtcg
aaccgcagcacatgcaaaggctgtgatcagaaaatagaaaaggatcagatccgtgtatcc
aagaaatctgtggacgcagagaagccccaactgggtctgatcgaccgctggtatcacaca
gcgtgttttgtgagccgcagggaggaactggtcttcaagcctgaatacaacgccgcccaa
ctgaagggtttcaacgcactacgggcagaagacaaggaggaacttaagaagcggctccct
gttgtcaaaactgaagggaagcgtacaactgacgaggtggatggagcatcaaagaaacaa
aagaaagaggaagaggatgagaagaagaagctggacgagcagctgaagaaccaaagtcag
ctaatttggggtatcaaggacaagctgaagaagttttgttcaaccaatgatatgaaggag
cttctgattgcaaatggccaagaagttccctctggagaatcaaatgtggtggactgcctg
gctgatggcatggcttttggtgctcttgaggcctgtacggagtgcaagggccaggtggtg
tttaagggcgatgcttattactgtacaggggacatctcagcctggacaaagtgtgtgtac
aagaccacaacacccatacgcagagactgggtcacccccaaggaattccacgaagttccc
ttcctgaaaaagttcaagttcaagcgacaggacaaagtttacccgaaggaggctccgacc
caaactctcaccaaagtcaaagccgaacccttggcgagtgcatccagtgccccgactgag
cgactgccagagggagcccctgcagacaaacctcttactggtatgaagctgttgactgtg
ggcaagctctccaagaacaaggatgatctaaagactgctgtggaggagatgggcggaaag
attagcaccacagccaataaggcctctctctgcctcagcaccaaaaaggaggtggagaag
atgagtaagaaaatggaggaagccagggacgccggcgtgcgtgtggtctccgaggatttc
ctcacagacatcaagtcgtcgggtaaagccctccaggaactggtctccctgcacgccatt
tcaccctggggtgcagaggtcaaggtcgaggcacaagcttcatctgtagcctctaagtct
ggagcgttggcgaccaagagcacaggcagggtgaaggaggaggaaggtggtagcaaatcc
aagaagatgaaactcacagtcaaaggaggagctgctgtggatccagattcaggtttggag
aacagcgctcatgtgttggagcagagcgggaagatgtacagtgctacgctgggccttgtg
gacattgtcagaggaactaactcctactacaaactgcagctgctggaggatgacgtacag
aaacgatactgggtgttcaggtcatggggaagagtgggcactaccattggaggcaacaag
ctggacaagtttaacgacaaaaactctgcacaggacaacttcctgggtgtttacaaagag
aagacaggcaacatctggagctgctccaacttcaccaaatatcccaataagttctacccc
ctggagattgactatggacaggacgaagaagcagtgaagaggctgacggcctccgccggc
accaagtccaagctggccaagcccattcaggagctgatcaagatgatctttgacgtagag
agcatgaagaaggccatggtggaattcgagattgacctccagaagatgcccctcggaaag
ctgagtaagaggcagatccagagtgcctattctctcctcactgaagtacagcaggctgtg
tcagactctcaggccgaagcccagatcctggatctctccaatcgcttctacaccctgata
cctcacgacttcggcatgaagaaacctccactgctcaacagcctggactacattcaagct
aaagttcagatgttggacaacctgttggacattgaagtggcatacagtttgctgagagga
ggggcccaggacaatgagagtgatcccattgacatcaactatgagaaactcaaaaccaag
attgaggttgttgacaagaatacagatgaggctgagatcattatgcaatatgttaagaac
acccacgctgctacacacaacacttacacactcgaagtgcaagagatcttcaaaattgtt
cgagagggagagcgccaacggttccgtcccttcgaggagctgcacaatcgccagctcctg
tggcacggttcccgcgccaccaactacgctggtatcatgtctcagggtcttcgcattgcc
cctccagaggccccagtgactggttacatgttcggtaaaggtgtgtactttgccgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccctgcaggcctcctactg
ctggccgaggttgccctcggcaacatgcatgaattgaagaaggcttcccacatttcaaaa
ttacccaagggcaagcacagtgttaaaggtttgggcagatctgctcctgatccaagtgca
tctgttactttggatggggtgcaagtgcctctggggaaaggagccaacactaacattgat
gacacaagtctcctgtacaacgagtacattgtgtatgatgtggcccagataaacatgaag
tatctcctgaagatcaagtttaactaccagacgtccctgtggtga
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