Cyclopterus lumpus (lumpfish): 117727702
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Entry
117727702 CDS
T09199
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117727702
03037 Cilium and associated proteins [BR:
clum03037
]
117727702
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117727702
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117727702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
117727702
NCBI-ProteinID:
XP_034384024
Ensembl:
ENSCLMG00005000704
LinkDB
All DBs
Position
3:2018013..2066196
Genome browser
AA seq
1175 aa
AA seq
DB search
MSTVSEPLVGSSRSLSAAKRHKSIRKNSRRIYSAYQDHQQGSSDDEDKEEERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRVLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHMASAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVERSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAVPVSPGNWSDPSSFLATISQPEVDSLSTLVSEISEPRHSTITTIA
TLLNVRNTSTSSPGSFSNQTSLFEKNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASILL
IDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFN
VLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYRPS
QHCGPFSGQEKIYDIISETVASDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYYLQAIAR
SLKFTNNQLRMQLQTERTEDKKKVFQMAAARLNAPEAAADKKPDQQESDITSQEASLNTP
SPQRNGSVTNFSSPVRHGNSIRTITQSASRAHLNRGRVAGSVRSPTVTILPKHRPEHIPN
RAPPFVFGPSGTCRSKSYHHMAYNPPARYSDNIHSDPLYRKAIRSIHPVEAAGIITAQSY
GGRRGHTTRYVIVNEHEPRKKLLRSSTRIPRHYLMEEPAEILELYPRNIKRYTPRATQHQ
PHPHRAHLSHQHLSEEEEDEEDGKGRRRMVSGKAHRPRSLSDLHQPAHFYIGDHVERHVS
VVKGAHTRARVRYGGQGEDEEENDEGEMDWGDLELNSRVQANVRAADSLLVRTRRHIHSP
DRHCQSPARTRHMESFVKPKMRPKLETPLTESDSASLASSSDQQNSSTDQYIQVIHNKEH
HLKADAGQGKLAKKKSKTNFDLNVIESNDLVCSNV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgtctgagcctttggttggcagcagcaggtctctgtctgcagccaagagg
cacaaaagtatcaggaagaactccagaaggatttattcagcctaccaggaccaccagcaa
ggctcctcggatgatgaagataaagaggaagagcgggtggacagcaacgatccagaggag
atgttccagaacattcagtaccagaaggagatcatcgccaacattcggaccagaccatgg
ccaatgagacgcaagctcaaagtcctaaagcaggccagagagatcgttctgaagtatgag
ggccgactcaccagaaccagaggttaccagactgcaggagctgatctgctgaagaaactc
tcacgtgtgctttacaacatcgtggttctgttcattccctgggaagtgaggatcaagaaa
atagaaagtcactttgggtcaggcgtggcctcctactttatattcctgcgctggttgttt
gggatcaacattgtcctcaccatcatgactggagccttcatcgtcctaccagagctgctg
gctggagctccgtttggaacaacaaggagtaaaactatccccaaggagcatatggcttca
gcccaggacctggacactatctggtctcttgggggctatctgcagtactctgtattattc
tatggttactatggcaggctgaggaaaattggcagtgcaggctaccggttgcccctcgcc
tacttcctggttgggatggctgtctttgcctacagtttcatcatccttttaagaaaaatg
gccaagaactctcgtctgagcctggccagcgcctctgatgagaacttcacgttctgctgg
agagttttctgtgcttgggattacctgataggaaacccagaggctgcagagagcaaagga
gctgccattgtcaacaacatcagggaagccatcgttgaggagcaggaaaagaagaaggat
actagtctggcagttctgatcagtctgcgtatcttagccaacatcctggtgctcctgtct
ctggctggcagcatctacatcatctactttgtggtggagcgttctcagaagctagagcag
gagaagccggagctgacgctttgggagaagaatgaggttagtgtggtggtttctctcatc
accatgattgctccgtctgcctttgagctggtgtctcaactggagatgtaccacccacga
acttcgctgcgtttccagttggccagagtgcttgttttgtacctggggaatctctacagc
ctcattattgccctccttgataaggtcaacagtatgagctctgctgtcccagtgagtcca
ggtaactggtctgaccccagctccttcctggccaccatctctcagcctgaggtagacagc
ctctccaccctggtttctgagatctctgagcctcgccacagtaccataacaaccattgcc
acgctgctgaatgttagaaacaccagcacaagcagcccagggtccttctccaaccagaca
tctctgtttgagaagaacacccgctctcagcaggacccatgctgggagacctacgttgga
caggagatgctgaagctgtccatcattgacatgatcttcacggtggccagcatcctgctc
attgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgggattta
gaaagcaagtttcctgaatatggagaattcaaaatagcagagaatgttttgcatctgatt
tataaccaaggaatgatctggatgggagcgttcttttctccctgtcttccagccttcaat
gtgttgaagctgattggtcttatgtatctgaggagctgggccgtcctcacctgtaatgtc
ccccatcagcaggtgtttcgagcctccagatcaaacaatttctacttggctatgctgctt
ttcatgctgtttctgtgtatgctgcccaccgtctttgccattgtgagatacagaccttca
cagcactgtggaccattcagtggtcaagaaaagatatatgacatcatctctgagacagtg
gccagtgatttccccctgtggttcagtaaagtgatgagttacgtcactagccctgtcgta
gtgctgccagcactgctgctgctgttcatgctaatatattatctccaggccattgccaga
tcactcaaattcaccaacaaccagctgaggatgcagctccagactgagcggaccgaggac
aagaagaaagtcttccagatggctgcagcgagattgaatgctccagaagctgcagctgac
aaaaagccagatcagcaggagagcgacatcacgagccaggaggcctcccttaacactcca
tctccccaacggaacggcagcgttacaaactttagttctcctgttcgtcatggaaacagc
atccgcaccatcacccaatcagcatctagggcgcacctgaacagaggaagggtggctgga
tcagtcagaagtccaacagtgaccatactgcccaaacacaggccggagcacatacctaac
agggccccaccctttgtttttggccctagtggtacctgcagatccaagtcctaccaccac
atggcatacaatcccccagctcgctattctgacaacatccactctgaccccctgtacagg
aaggccatacgctccatacatccagtcgaggctgccgggatcatcactgcacagagttat
ggaggacggcgcggtcacaccacccgctatgtgattgtcaatgagcacgagcccaggaag
aagctgctgcgctcgtccacacggatcccacgtcattacctcatggaggagcctgcagag
atccttgagctgtacccacgcaacattaaacgctacacaccccgcgccactcaacaccaa
ccacatcctcacagggcccacctttcgcatcagcatctgagtgaagaggaagaggacgag
gaagatggaaaaggcagaagaaggatggtgtcggggaaggctcatcgaccccggtccctc
tctgaccttcaccagccggcacacttctacatcggggaccatgtagagaggcacgtttct
gttgttaaaggcgctcacactcgagctcgagtaagatatggagggcaaggagaggatgaa
gaggagaatgatgaaggagaaatggactggggagatttagagttaaattcccgggttcag
gccaatgtgagagcagcagactcgctccttgtgcgaaccaggcggcacatccattcccca
gatagacactgtcagtccccagccaggaccaggcacatggagtcttttgtgaaacccaag
atgagaccaaaactggagacccctctgaccgagtcagactcagcctccctggcctccagc
agtgaccagcagaacagcagcactgaccagtacattcaggtcatccacaacaaggagcac
catctcaaggctgatgccgggcaagggaagctggccaaaaagaagtccaaaaccaacttt
gatctaaatgtcattgagtcaaatgaccttgtctgctccaatgtatga
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