Cyclopterus lumpus (lumpfish): 117727853
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Entry
117727853 CDS
T09199
Symbol
hlx1
Name
(RefSeq) H2.0-like homeobox protein isoform X1
KO
K09339
homeobox protein HLX1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117727853 (hlx1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117727853 (hlx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
117727853
NCBI-ProteinID:
XP_034384257
Ensembl:
ENSCLMG00005017891
UniProt:
A0A8C3A8I3
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All DBs
Position
24:9873645..9877633
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AA seq
376 aa
AA seq
DB search
MYTAGLNPFYASNFSLWSAYCAGGFAVDTMKKPSFCIADILQAGDAENIPGSSALMVHMG
HHHRAPHGHSGSSPLRPSPVAPEPYGARVSPASPYNRHGLQLTSVSRTAFNSQQAPPPSS
KDLKFGIDRILSTDFDQRGKEKSSLRDLTSIVSSNRQSGIHVPIQPPASQYFSCIDPGMS
DASSMMSSLGSSSSRHSGQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKG
LEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEQPDKSA
SESGSREHKEPAEESECESEGRSECESDEAPEENSDGHVDICEPTNQTSVIISGSSGPVS
GGEAAATATEAPQILI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagccgggctcaacccgttttacgcgtcaaactttagcctctggtctgcgtac
tgcgcggggggcttcgcggtggatacgatgaagaaaccctcgttttgcatcgcagacatt
ttgcaggcaggagatgccgagaacatcccaggatcgtcggcgctcatggtgcatatggga
caccaccaccgcgcgccgcacggacactccggcagctcgccgctgcgcccttctcccgtc
gcgcccgagccgtacggcgcgagggtgagtccggcgtctccttacaacagacacggacta
cagctgacatcagtctccagaacggcatttaactcccaacaagcacccccgccttcaagc
aaggacctcaaattcggaattgatcggatattgtcgacagactttgatcagagaggcaaa
gagaagtcgtcattaagagatctcacatccatcgttagctcgaaccgtcagtcaggaatc
cacgtccccattcagcctccggccagccagtacttctcctgcatagaccccgggatgagc
gacgcgtcctccatgatgagttcactaggcagcagcagcagcaggcattcaggccagcat
cagtttcaggacaccttcccaggtccatatgctgttctcactaaagacaccatgccacag
acgtacaagaggaaaaggtcgtggtcgagggcagtgttttcaaacctgcagaggaaagga
ctggagaaaagatttgagatacagaaatatgtcaccaagccggacagaaagcagctggct
gcgatgctcgggctgacagacgcccaggtgaaggtgtggttccagaacagacgcatgaag
tggagacactccaaagaggcgcaggctcagaaggacaaggagcagccggacaagagcgcg
tctgagtccggcagcagggagcacaaagagccggcggaggagtccgagtgtgagagcgag
ggacggagcgagtgtgagtccgacgaggcaccggaggaaaactccgacggacatgtggac
atttgtgagccaacaaaccaaaccagcgtgatcataagcgggagcagcgggccggtgagc
ggcggggaggcggcggccacagccacagaggcccctcagatactgatatga
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