Cyclopterus lumpus (lumpfish): 117727997
Help
Entry
117727997 CDS
T09199
Name
(RefSeq) sialic acid-binding Ig-like lectin 10 isoform X1
KO
K06749
sialic acid binding Ig-like lectin 10
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117727997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
clum04091
]
117727997
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117727997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
ig
C2-set_2
Ig_CD22
C1-set
Izumo-Ig
Ig_6
C2-set_3
DUF2135
LapA_dom
Motif
Other DBs
NCBI-GeneID:
117727997
NCBI-ProteinID:
XP_034384493
LinkDB
All DBs
Position
25:12467453..12474505
Genome browser
AA seq
730 aa
AA seq
DB search
MFVLIWATLLFSVRGIDAVTGESVKRLQSCYSEFCITLIEGEITAEAGLCVVIPCFFTTG
NGFTPQYVVWYKCEPPKGRCGDADVIFHTNENNNNKVQAEFLGRVSLLEPDVSQKNCSII
INELTESDSGKYQVRVNSVNYWGQERSTFSTRATVSVKGLTQKPSVLIPPLTEGQQTTLT
CTAPGLCSGSHPEITWTWREAGEKDSYITGNITAVTQGRSSTLTFNPSAEHHGTNVTCKV
NFTSNISTDETATLNVAYVKDFRTTGTTIVKEGETLNLTCSVESFPPSLITWTTSSETNR
QNGTERNRQNNTELFMQRESETGTLSISNVTTDNSGKYICRAKHLNITLVKIVDVKVIYV
KKPVITGRTTVEEGDALSLTCSVESFPPSHITWTVLGSNKKLYNGPEKDTGSATLVLPNV
TTEVSGQYICTAQHLDKTVATYADVTVTWFSKILNNSGCEVQSGVLTCVCISEGFPLPTI
EWPLLKNHTEYSVITTVSNHTVNSTATLTVKDHSGTSIECVSSSGNGEARETINIRKNTL
EQKGTPLRLVSWLGVVIAFLLGVLLSALLCGLTTKCHRKIRKISRNLDETLEMGTSPEDP
LIDAGQAVEDDQTYYQEFADGEGGAAAAEQAAPDLNGGPNDVQYASIDFSVLRRKNPKEA
EKKQETTETEYAEIKREVKEETEHNGGEEGDVLERAMLGEDEGTKHCVPGEDDREDAAVY
SNVKDIMSEI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttctcatctgggcgactctgcttttctctgtgaggggcatcgatgctgtcaca
ggtgaatcagtgaagagattacaatcctgttacagtgaattctgtatcactctcattgaa
ggagaaataacagcagaggctggactctgtgttgtgataccgtgttttttcactactggt
aatggctttacaccccaatatgtggtgtggtacaaatgtgaaccacctaaaggcagatgt
ggtgatgcagacgttatattccacactaacgagaacaacaacaacaaagttcaggctgag
tttttaggacgagtttcactgttggagcctgatgtgagtcagaagaactgcagcatcatc
atcaatgagctcactgagtcagactctggaaaatatcaagtcagagttaatagtgtcaac
tattggggacaagagagatccacattttctacaagagcaactgtctctgttaaaggtctt
acccagaagccctcagtgctgattcctcctctgacagaggggcagcagaccacactgacc
tgcactgctcctggtctctgctctggatctcatcctgaaatcacctggacgtggagagaa
gcaggagagaaggactcttacatcacaggaaacatcactgcagtcacacagggacgcagt
tcaactttgacctttaacccttcagctgaacaccacggcaccaatgtcacctgtaaggtc
aacttcacaagcaacatcagtacagatgagacagcgactctgaatgtggcctatgtcaag
gactttagaacaactgggactacaatcgtgaaggagggcgagactctgaatctgacctgc
agtgttgaaagtttccctccatctctcatcacgtggacaacatcttctgagacaaacagg
caaaatggaacagaaaggaatcggcagaacaacactgagctattcatgcagagagaaagt
gaaactggcactttgtccatctctaatgtgacaacagacaattctgggaaatacatctgc
agagcaaaacatctgaatataaccctggtgaaaattgttgatgtaaaagtcatatatgtg
aagaaacctgtcatcactggtcgtacaacagttgaggagggagatgctctgagtttaacc
tgcagtgttgaaagttttcctccatctcatatcacatggactgtacttggctccaacaaa
aagctgtacaatggacctgagaaggacactggatcggccacactcgtcctccctaatgtg
acgacggaggtctccggacagtacatctgtacagcacaacatctggacaagactgtggcg
acgtatgctgatgtaaccgtgacttggttttcaaagatcttaaacaactctgggtgtgag
gttcagtcgggggtactgacctgtgtgtgcatcagtgaggggtttcccttgcccaccatc
gaatggccgctgttgaagaaccacacagagtactctgtgatcaccactgtgtccaaccac
acagtcaacagcaccgccactctaactgtaaaagaccacagcggcacttctattgagtgt
gtcagcagcagtggaaatggggaagcaagagaaaccatcaacatcagaaaaaacacatta
gaacaaaagggaacccccttaagactagtttcgtggctaggagtcgtcattgccttcttg
cttggggtactactttcagcacttctttgcggtttgaccacaaaatgccacagaaaaata
cgcaagatctctagaaacctggatgagactctggagatggggaccagtccagaggatcca
ctgatagatgctggtcaagcagtcgaagatgatcagacctactaccaagagtttgctgat
ggagaaggaggagctgcagcagcagaacaagcagcccctgatctcaatggtggacctaac
gacgtgcagtacgccagcattgatttctccgttttgagaagaaagaatcccaaggaggca
gaaaagaagcaagaaaccacagagacggagtatgctgaaattaagagagaagtcaaagag
gaaacagaacacaatggcggagaggaaggtgatgtgttggagagggcgatgctcggggag
gatgaagggacaaaacattgtgttcctggagaggacgacagggaggacgccgcggtgtac
tccaacgtgaaggatattatgtctgagatttga
DBGET
integrated database retrieval system
