KEGG   Cyclopterus lumpus (lumpfish): 117728109
Entry
117728109         CDS       T09199                                 
Name
(RefSeq) cullin-5-like
  KO
K10612  cullin 5
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117728109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117728109
   03400 DNA repair and recombination proteins [BR:clum03400]
    117728109
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     117728109
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117728109
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 117728109
NCBI-ProteinID: XP_034384724
Ensembl: ENSCLMG00005006228
LinkDB
Position
25:complement(2832550..2851976)
AA seq 780 aa
MASSNLLKNKGSLQFEDKWDSMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKVDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKTNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERQGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTLFKETLLVESPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEEHIVNAGLADMVAAAETITSDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGMKTQPESKCPELLANYCDMLLRKTA
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNRLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYDPPVSSPKDF
TDSTLFYVNQEFSIIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKREEADINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgtcgtccaatttgttaaagaacaaggggtccctgcagtttgaggacaagtgggat
tcgatgcgacccatcgttctcaagctgctcagacaggaagccgtcaccaagcaacagtgg
ttcgacttgttctcagatgtccatgctgtgtgtctatgggatgacaaaggaccagccaaa
atccaccaagccctcaaagtggacatcctagacttcattaaacaagcacaggctcgggtg
ctgagccaccaggacgacacagcgctgctgaaggcctacattgtagagtggaggaagttc
ttcacccagtgcgacatcctgcccaaacccttctgtcagttggagatcacactcatgggc
aaacaaggcagcaacaagaaaactaacatggaggacagcatcgtgcgcaagctcatgttg
gacacgtggaacgagtccatcttttccaacattaagaatcgcctacaggacagcgccatg
aagctcgtacatgccgagaggcagggggaggccttcgactcccagctcgtgataggagta
cgagagtcgtacgtcaacctgtgctctaacccggaggacaagctgcagatctacagggat
aactttgagaaagcctacctggactccacagagaggttttacagaacacaggcaccgtcc
tatttgcaacagaacggcgtccagaactacatgaaatatgcagacgcgaagctgcgagaa
gaggagaagagagcgctgagatatctagagacacgtcgtgaatgtaactctgttcaagca
cttatggagtgttgtgtgaatgcactggtgaccttgttcaaagagaccctcctcgtcgaa
agtccggggatgatcaaacgaaacgagacggataagctgcacctgatgttttcactgatg
gacaaagttcccagcgggatcgagcccatgctgaaagacctggaggaacatatcgtcaat
gctggactagcagacatggtggctgctgctgagactatcacatctgactctgaaaagtac
gtggagcagttgctgactttgtttaaccgcttcagtaagctggtaaaggaggccttccag
gacgaccctcgcttcctcacagcaagagataaggcgtacaaggcagttgtcaatgacgcc
acaatcttcaaactggagctgcctttgaaacagaaaggtgtgggtatgaagactcagccg
gagtcaaagtgtcctgagctgctggcaaactactgtgacatgctgctgaggaagactgct
ctgagcaagaagctcacctcagaggaaatcgagctcaaactcaaagaagtgctcttggtg
ttgaagtacgtccagaataaagacgtgttcatgcgttaccacaaagctcacctgaccagg
cgcctgattctggacatatcggccgacagtgagattgaagagaacatggtggagtggctg
agagaagtggggatgcctgcagattatgtaaacaagctggccaggatgtttcaggacatc
aaggtctcagaggacctcaatcaggtcttcaaagagatgcacaaacacaacaggctggca
ctgccagcggacagtgtgaacattaagatcctgaacgccggagcgtggtcacgaagcagc
gagaaggtttttgtctcgttgcccacggagctggaggacctgatccccgaggtggaagac
ttctacaagaggaatcacagcggacgcaagctccactggcatcacctcatgtccaacggc
atcatcacctttaaaaacgaggtggggcagtacgacctggaggtgacgacattccagctg
gcggtgttgtttgcctggaaccagagaccaagggagagaatcagctttgagaacctcaaa
ctggccacggagctgcccgacgcagagctacgacgcacactctggtctctcgtggccttc
cccaagctgaagagacaggtgttgtcctatgaccccccagtcagctcgcccaaagacttc
acagacagcacactcttctacgtcaaccaggagttctcaatcatcaaaaactccaaagtc
cagaagcggggaaagatcaatctgattggtcggctgcagctgaccacagagcgaatgagg
gaagaggagaacgaaggaatcgttcagctcagaatactcagaactcaggaggccatcatc
caaatcatgaagatgaggaagaggatcagtaatgcccagctgcagacggagcttgtggag
atcctgaagaacatgttcctgcctcagaagaagatgatcaaggagcagatcgagtggctc
atcgaacacaagtacataaagagggaagaggcagacatcaacaccttcatctacatggcc
tag

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