Cyclopterus lumpus (lumpfish): 117728153
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Entry
117728153 CDS
T09199
Name
(RefSeq) ubiquilin-1-like
KO
K04523
ubiquilin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117728153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117728153
03051 Proteasome [BR:
clum03051
]
117728153
Membrane trafficking [BR:
clum04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117728153
Proteasome [BR:
clum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117728153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
Ubiquitin_5
STI1-HOP_DP
Dsc3_N
YukD
UBA_7
OTU1_UBXL
Rad60-SLD_2
UN_NPL4
CUE
UBA_HOIP
Ubiquitin_USP47_N
eIF-5a
DUF5740
Motif
Other DBs
NCBI-GeneID:
117728153
NCBI-ProteinID:
XP_034384808
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All DBs
Position
25:11989712..11994713
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AA seq
375 aa
AA seq
DB search
MAEKSSSDRTEDVNMEKDVAPGAPVMVVTVKTPNGKEDISIPEGSSVSQFKQEVSKKFEA
QQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTSPKSTGDSTSQTSSRSATPQTNS
SSSTSAADRAGSGTSPTPTQLANAMGGLGDLSGLLGQGMRSTSFMEMQQQVRSQLMSNTQ
MLSQIAGNPMVQNMMSNPDLMRQMLAGNPQMQQLVEQTPDISSMFNNPEVMRQMQSPETL
SMMTNPRAMQALIQIQQGLQTLQTEAPGFMSRIAPGGLSVPPATGGSIPPEVPQPAAMAT
GSSPSSATSPPDQQLLQQMLQMFAGGRPPSQTPEVRFQQQLDQLNTMGFIDHQANLQALI
ATGGDVNAAIERLLA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaagcagctcggaccgtacggaggatgtcaacatggagaaagacgttgct
cccggagcaccggtgatggtggtcaccgtcaaaacgcccaatggaaaagaagacatctcc
attccagaaggttcctccgtgtcccagttcaaacaggaggtatctaagaagtttgaggcc
cagcaggaccagctggtgttgatatttgctggaaagattctgaaggatggcgatacgtta
aaccagcacggaatcaaagatggcctcaccgttcatctggtcatcaagacttccccaaaa
tcgaccggtgactctacgtctcagacaagttcccgttctgcaacgcctcaaacgaacagc
agcagcagcacgagtgcagcagaccgagccggaagtggaacgagtccgacaccgacgcaa
cttgcgaatgcaatgggtggactgggtgacctgtccggcttgttgggtcagggcatgcgt
tcaaccagcttcatggagatgcagcagcaggtgcggagtcagctgatgtccaacacacaa
atgctgtcgcagatagcaggcaacccgatggtgcagaacatgatgtccaacccagacctg
atgagacagatgctggcaggcaatcctcagatgcagcagctcgtggaacagaccccggac
atctccagcatgttcaacaaccctgaggtcatgaggcagatgcagagtcccgaaacactt
tctatgatgaccaaccccagagccatgcaggccctcatacagatccaacagggcctgcag
accttgcagaccgaggccccgggattcatgtccagaattgctcctggaggtctctcagtt
cctccagccacagggggcagcatccccccagaggtccctcagcctgctgccatggcaacc
ggatccagcccctcctcagccaccagtccccctgaccagcagctcctccagcagatgtta
cagatgttcgcaggcggaaggccaccatctcagacccccgaggttcgcttccagcagcag
ctcgaccagctcaacacgatgggcttcatcgaccaccaagccaacctgcaggcactcatc
gccacgggaggggacgtcaacgccgccatcgagaggctcctggcctaa
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