KEGG   Cyclopterus lumpus (lumpfish): 117728153
Entry
117728153         CDS       T09199                                 
Name
(RefSeq) ubiquilin-1-like
  KO
K04523  ubiquilin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117728153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117728153
   03051 Proteasome [BR:clum03051]
    117728153
Membrane trafficking [BR:clum04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    117728153
Proteasome [BR:clum03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    117728153
SSDB
Motif
Pfam: UBQLN1 ubiquitin UBA Rad60-SLD Ubiquitin_5 STI1-HOP_DP Dsc3_N YukD UBA_7 OTU1_UBXL Rad60-SLD_2 UN_NPL4 CUE UBA_HOIP Ubiquitin_USP47_N eIF-5a DUF5740
Other DBs
NCBI-GeneID: 117728153
NCBI-ProteinID: XP_034384808
LinkDB
Position
25:11989712..11994713
AA seq 375 aa
MAEKSSSDRTEDVNMEKDVAPGAPVMVVTVKTPNGKEDISIPEGSSVSQFKQEVSKKFEA
QQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTSPKSTGDSTSQTSSRSATPQTNS
SSSTSAADRAGSGTSPTPTQLANAMGGLGDLSGLLGQGMRSTSFMEMQQQVRSQLMSNTQ
MLSQIAGNPMVQNMMSNPDLMRQMLAGNPQMQQLVEQTPDISSMFNNPEVMRQMQSPETL
SMMTNPRAMQALIQIQQGLQTLQTEAPGFMSRIAPGGLSVPPATGGSIPPEVPQPAAMAT
GSSPSSATSPPDQQLLQQMLQMFAGGRPPSQTPEVRFQQQLDQLNTMGFIDHQANLQALI
ATGGDVNAAIERLLA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggcggagaaaagcagctcggaccgtacggaggatgtcaacatggagaaagacgttgct
cccggagcaccggtgatggtggtcaccgtcaaaacgcccaatggaaaagaagacatctcc
attccagaaggttcctccgtgtcccagttcaaacaggaggtatctaagaagtttgaggcc
cagcaggaccagctggtgttgatatttgctggaaagattctgaaggatggcgatacgtta
aaccagcacggaatcaaagatggcctcaccgttcatctggtcatcaagacttccccaaaa
tcgaccggtgactctacgtctcagacaagttcccgttctgcaacgcctcaaacgaacagc
agcagcagcacgagtgcagcagaccgagccggaagtggaacgagtccgacaccgacgcaa
cttgcgaatgcaatgggtggactgggtgacctgtccggcttgttgggtcagggcatgcgt
tcaaccagcttcatggagatgcagcagcaggtgcggagtcagctgatgtccaacacacaa
atgctgtcgcagatagcaggcaacccgatggtgcagaacatgatgtccaacccagacctg
atgagacagatgctggcaggcaatcctcagatgcagcagctcgtggaacagaccccggac
atctccagcatgttcaacaaccctgaggtcatgaggcagatgcagagtcccgaaacactt
tctatgatgaccaaccccagagccatgcaggccctcatacagatccaacagggcctgcag
accttgcagaccgaggccccgggattcatgtccagaattgctcctggaggtctctcagtt
cctccagccacagggggcagcatccccccagaggtccctcagcctgctgccatggcaacc
ggatccagcccctcctcagccaccagtccccctgaccagcagctcctccagcagatgtta
cagatgttcgcaggcggaaggccaccatctcagacccccgaggttcgcttccagcagcag
ctcgaccagctcaacacgatgggcttcatcgaccaccaagccaacctgcaggcactcatc
gccacgggaggggacgtcaacgccgccatcgagaggctcctggcctaa

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