KEGG   Cyclopterus lumpus (lumpfish): 117728165
Entry
117728165         CDS       T09199                                 
Symbol
cthrc1b
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
  KO
K25700  collagen triple helix repeat-containing protein 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:clum03037]
    117728165 (cthrc1b)
Cilium and associated proteins [BR:clum03037]
 Other cilia and associated proteins
  Stereociliary proteins
   117728165 (cthrc1b)
SSDB
Motif
Pfam: CTHRC1_C Collagen
Other DBs
NCBI-GeneID: 117728165
NCBI-ProteinID: XP_034384824
LinkDB
Position
25:complement(8604531..8608610)
AA seq 301 aa
MLLLNTTNDHMKSICCTLARVRVSQGCCETRFSPRRTSTGSVPPRPALLDSERSGVQSVT
SLQSAAVRSSTMSPLIARLLLLLVCLALPLYGVEKVRNRGYRKDPDADKLGSCIQGPAGT
AGREGNPGTNGIPGTPGIPGRDGLKGEKGECVNEVFEEPWRPNYKQCAWNSLNYGIDLGK
IADCTFTKLRTDSALRVLFSGSLRLKCKNACCQRWYFTFNGAECTAPLPIESIIYLDQGS
PELNSTINIHRTSSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRVIIEELP
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcttttattaaacaccacaaacgatcacatgaagtcaatatgttgtacactggcacgc
gtacgtgtatcacagggatgctgtgagacacggttttcccctcggaggacgtcgactggc
tccgtcccccctcgtcctgccctcctggactcggaacggtctggagtccagagtgtcaca
tctctccagagcgcagccgtccgttcctccacgatgtctccgctcattgcccgcctgctg
ctgctgcttgtctgcttggctttacctctttacggcgtggaaaaggtgagaaatagagga
taccgaaaggatcctgacgccgacaagcttggcagttgcattcagggaccagcgggcacc
gctggcagggaggggaacccaggaaccaacggcatcccggggacgccgggcatccctggc
cgcgacgggctcaagggcgagaaaggcgagtgcgtcaacgaggtcttcgaggagccctgg
aggcccaactacaagcagtgcgcctggaactctctgaattatggcatcgacctgggtaaa
atagccgactgtacgttcaccaagctgcgtaccgacagcgccctcagagtcctcttcagt
ggctccctcaggctcaagtgtaagaacgcgtgctgccagaggtggtacttcaccttcaat
ggggcggagtgcactgcgcccctgcccatcgagtccatcatctacttagaccagggaagt
ccggagctcaactccaccatcaacatccacagaacgtcctcggtcgaagggctgtgcgag
ggtgtcaaagcagggctggtggatgtggccgtgtgggtggggacctgcgccgactatccc
agaggagacgcatctacagggtggaattcagtatccagggttatcattgaggaactgccc
aaataa

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