Cyclopterus lumpus (lumpfish): 117728216
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Entry
117728216 CDS
T09199
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117728216 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117728216 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117728216 (gdf6a)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Transforming growth factors (RSTK binding)
117728216 (gdf6a)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Motif
Other DBs
NCBI-GeneID:
117728216
NCBI-ProteinID:
XP_034384905
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All DBs
Position
25:9288998..9294744
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AA seq
448 aa
AA seq
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MDASRLVTLYLGLLLTFLGNIPCFQSAAIISPSAPRRNRGARISHRDGQRSSKILKDILG
STHPIAGHHKEDLKDAIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLHSPLRRQKYLFDVSTLSDKEELVGAELRIFRRAPVNLQTSLQTTGLYDIQLYPCRS
DRLLDSRSLDPLDSTKAGWEVLDAWDMFKANQHHYHHPHHHHHQQHFQQGNQLCFQLRVT
LRKSDTEVDLRQLGLDRSGRSQQEKAILVAYTRSKKRENLFNEMKEKIKSRRSAGEKEEA
AATAVAKEEEEGLSLRGVKGEGPRRRRRTALSNRHGKRHGKKSKSRCSKKALHVNFKELG
WDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTPPSCCVPTKLSP
ISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgactcgtaacgctatatctgggtctgctcctcactttccttgggaat
ataccgtgtttccagtctgctgctatcatctctccctctgcgccgagaagaaaccgggga
gcccggatctctcatcgggacggacaaaggtcatccaagatcctaaaagacatcctcggg
tctacgcaccctatcgcgggccatcacaaagaagacctaaaggacgctattgtgccccat
gaatacatgctctccatatacaggacatactcggctgcagagaagctcggactaaacgca
agctttttccgctcctctaaatctgccaacaccataacaagttttgtggacagaggaaca
gacgatctgttgcactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctt
tcagacaaagaggagctggtcggggcggaattaaggatatttaggagagcgcccgtgaat
ttgcagacttccctgcagacgacgggcctctacgacatccagctctacccctgccgctcg
gacaggctgctggactccaggtctctggacccgctggactccaccaaggccggctgggag
gttttggacgcgtgggacatgttcaaagcgaaccagcatcattaccaccatcctcatcat
caccaccaccagcaacacttccagcaggggaaccagctctgcttccagctccgcgtcacc
ctccgcaaatcagacaccgaggtggacctgaggcagctggggctggacaggagcggtcgg
tcccagcaggagaaggccatcctggtggcctacacgcgctccaagaagagggagaacctg
ttcaacgagatgaaggagaagatcaaatcgcggaggtcggccggcgagaaggaggaggcg
gcggcgacggcggtggcgaaggaggaggaggaggggctgtcactgaggggggtcaaaggg
gagggtccccggcggaggcggaggacggcgctgagcaaccggcacggcaagaggcacggg
aagaaatccaaatccaggtgcagcaagaaggcgctccacgtgaatttcaaggagctgggc
tgggacgactggatcatcgcgcccctggattacgaggcgtaccactgcgagggggtgtgc
gacttccccctgaggtcgcacctggagccgaccaaccacgccatcatacagacgctcatg
aactccatggaccccaacagcaccccgcccagctgctgcgtgcccaccaaactcagcccc
atcagcatcctatacatagactcgggaaacaacgtggtgtacaaacagtacgaggacatg
gtggtggagcagtgcgggtgcaggtag
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