Cyclopterus lumpus (lumpfish): 117728238
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Entry
117728238 CDS
T09199
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a
KO
K04845
voltage-gated sodium channel type I beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117728238 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117728238 (scn1ba)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117728238 (scn1ba)
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Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_CD22
Ig_3
Novirhabdo_Nv
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
117728238
NCBI-ProteinID:
XP_034384934
Ensembl:
ENSCLMG00005013805
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All DBs
Position
25:complement(12364478..12376391)
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AA seq
223 aa
AA seq
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MSAVQELLLLLPLALLVLQATLCRGACVEVDSNTEAVADEGFKLGCISCKRRGEVKATAF
VKWSFKASDENKFADLFIYQNGRADIIDSRFSDRLHWNGSKKTDDLQDGSILILNVTFND
SGTYMCTFNRTLKYLNYEFQTSNIKTFNMKVVPRLTRGLASILSEVMMYVSIIGLQVWLV
IEMIYCYRKISAAGEEALRESAAEYLAIASESKDHCAGVQVAE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtccaggagctcctgctgctacttcctctggctctcctggtgcttcaagcg
actctgtgccgtggagcctgcgtggaggtggactcaaacacagaggccgtggccgatgaa
ggcttcaaactgggctgcatctcctgtaagaggaggggcgaggtgaaagccacggccttt
gttaagtggtccttcaaagcctcagatgagaacaagttcgccgatttattcatctatcaa
aatggaagggccgacatcatcgactcacgtttctccgatcgtctgcattggaacggcagc
aagaagaccgatgacctgcaggacggctccatcttgatcctcaatgtgaccttcaatgac
agcggaacctacatgtgcacattcaaccgcaccctcaagtatctcaactacgagtttcaa
acctccaacatcaagaccttcaacatgaaagtggttccccggctcaccaggggactggcc
tccattttgtctgaggtgatgatgtatgtttccatcatcgggctgcaggtgtggctcgtg
atcgagatgatttactgctacaggaagatttcagcggcaggagaagaagctctgagagag
agcgcggccgagtatttagcgatagcatcggagagtaaagatcattgtgccggcgttcaa
gtggcagaatag
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