Cyclopterus lumpus (lumpfish): 117728254
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Entry
117728254 CDS
T09199
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04148
Efferocytosis
clum04218
Cellular senescence
clum04310
Wnt signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117728254
04310 Wnt signaling pathway
117728254
04020 Calcium signaling pathway
117728254
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117728254
09143 Cell growth and death
04218 Cellular senescence
117728254
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117728254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117728254
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117728254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
117728254
NCBI-ProteinID:
XP_034384952
Ensembl:
ENSCLMG00005018219
LinkDB
All DBs
Position
25:complement(9764961..9818947)
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AA seq
917 aa
AA seq
DB search
MQDTFWPSVNSKFGFGATAGKERGVQLLTSLEMKSAEEDAYSYTPNVSLSLPLGMGNPCL
ATQYHTLQSSPVISVSSCHQTGYSLQNDNHAASGYYLPHGLRPNGSPALESPRIEITAYS
QYPEDEVEESNSEDHIIKRGVNSIVTLTLPNADGYRDPSCLSPASSISSRSCNSEASSYE
SGFYNYENSPQNSPWQSPCVSPKGSSSLMSCPHASGPVASPHHSPSTSPQIGAVAEEGWP
AQPRGSRPNSPSYSGGGGVNNGSMGKRKYSLNGTTYRQTSCSPNQSPNPSPHGSPRVSIT
DENWQANTNQYTNSAIVAAINALTTDGVVDIGEGIPIKTRKTMLDHSMSLKLDPDGELCH
EDYPSRLALKKESYCGGFLDVPQHPYSWSKPKPYLSPSLPALDWQLPSCSGPYNLQIEVQ
PKSHHRAHYETEGSRGAVKAVCGSHPVVQLYGYMESEPLTLQLFIGTADDRLLRPHAFYQ
VHRITGKTVSTASHEVMQSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDI
GRKNTRVRLVFRVHINQPNGRTLSLQAASNPIECSQRSAQELPLVEKQSVDSYPATGGKM
MLLSGLNFLPDSKVVFVEKAQDGHHLWETEAKVDKDSVKNSTVVVEIPPYRNQRISSPVQ
VNFYVCNGKRKRSQYQRFTYLPPNAPIIKTEPNDEYDSLGIARLPVHSKPYYSRPRLTPI
VPVADPDACLVGGYPPCPPHHAAMPSSSPSSSPTLHDLSPVAYSPTHAAPPGPVVPPIQE
SPGHPNLAHPASPDHNSPLGMLHSQGSPIHLNSPGPHGYHPIYANSSPSSSPESHPSTPG
GTVESPFVQAYSPGQAQAAAGSARAGGSSPSLLPEDASPPSMAITVKQEPQELDQMYLDD
VNEIIRNDLSSISVHTA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataccttctggccgagcgtcaattccaagttcggctttggagcgacagccggt
aaagagcgaggagtccagcttctcacctctctcgagatgaagtctgcagaagaagatgca
tacagctacacaccaaacgtcagtttgtcccttccactggggatgggcaacccctgtctg
gccacccagtaccacactttacagtccagcccggtcatctcggtttcgtcttgccaccag
acaggctacagcctccaaaatgataaccatgcagcgtccggctattacctgccccacggg
ctgagacccaatgggtccccggctttggaaagcccccgtatcgagatcacggcctacagc
cagtatcccgaggacgaggtagaagagagcaacagtgaggaccacatcatcaagcgaggc
gtcaactccatcgtgactctgacgctgcccaatgccgacggctaccgtgaccccagctgc
ctcagcccagcaagtagcatttcctctcgcagctgtaactcagaggcgtcctcttacgag
tcgggcttctacaactacgaaaactccccacagaactctccctggcagtctccctgtgtt
tcccccaaaggctcctcttcgctcatgtcttgcccacatgccagcggtcctgtggcttcc
cctcaccattcaccctccacctctcctcagataggagccgtggccgaggaaggctggccg
gcgcaaccccgtggctcccggcctaactccccctcctacagtggaggcggcggagtcaac
aacggcagcatggggaagagaaagtacagcttaaatggcaccacctaccgtcagacatcc
tgctcacccaaccagtcgcccaacccatccccacatggctcccccagggtcagcatcacg
gatgagaactggcaggccaacaccaaccagtacaccaattctgccatcgtggccgccatc
aacgctctaaccacagatggagtagtggacattggggaggggatcccaatcaagacgcgg
aagaccatgctggaccactccatgagcctgaagttggaccccgatggggagctctgccat
gaggactacccctcccgtctggccctcaagaaggagagctactgtggagggttcctggat
gtgccccagcatccgtactcctggtccaaacccaagccttacctcagtccatctctgcca
gctctcgactggcagcttccgtcctgctccggcccgtacaacctacagatcgaggtgcag
ccaaagtcccaccacagggcccactacgagaccgagggcagccggggggcggtgaaggcg
gtatgtgggagccaccctgtcgtgcagctttatggctacatggaaagcgagccgctcacc
ctgcagctgttcatagggaccgcagacgaccgcctcctgcgaccacatgccttctaccag
gttcaccgcatcactggcaaaaccgtctccaccgccagccatgaagtcatgcaatccaac
accaaagttctggagatccctctgctgcctgaaaacaacatgagagccataatcgactgc
gcagggatcctgaagctgcgcaactcggacatcgagcttcgcaaaggagaaacggacatc
ggacgcaagaacacgcgcgtccgactggtgttccgtgtgcacatcaaccagcccaacggc
aggacgttgtccctgcaggctgcttccaaccccatcgaatgctcccagcgctcagctcag
gagcttccgttggtggagaagcagagtgtggatagttaccctgccaccggaggcaaaatg
atgctcctgagtggcctcaacttcctccccgactccaaggtggtgttcgtggagaaggcc
caggatgggcaccatctgtgggagacagaagccaaagttgacaaggactccgtcaaaaat
agtactgttgttgtggagatcccgccgtacaggaaccagagaatatccagcccggtgcag
gttaacttctacgtctgcaacggcaagaggaagaggagccagtaccagcgcttcacctac
ctgcctcctaacgcgccgataataaagacagaacccaatgatgaatatgattctctgggg
attgcgagactgcccgtgcattcaaagccctattacagccgacccaggctcactcccatc
gtgcctgtagccgaccctgatgcctgcctggttggtggctaccctccctgcccgcctcac
catgctgccatgccatcgtcgtcccccagctccagccccaccctgcatgacctgtccccc
gtggcatacagccccacccatgcggcaccgccaggccctgtagtgcccccaatccaggag
agccctggccaccccaacctcgcccacccagcatcgccagaccacaactctcccctaggg
atgcttcattcccaaggcagccccatccacctcaacagcccagggccccatggttaccat
cctatctatgccaacagcagtccctcatcctccccggaatcccacccatccactcctggg
gggactgtggagagcccgttcgttcaggcctacagccccggtcaggctcaggcagcagcc
ggctcagcccgggccggagggagctcacccagcctgttacccgaagacgccagcccccct
tcgatggccatcaccgtcaaacaggagccccaggaactggaccagatgtacctagatgat
gttaacgagatcatcaggaacgacctctccagcatctccgtgcacaccgcatag
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