Cyclopterus lumpus (lumpfish): 117728286
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Entry
117728286 CDS
T09199
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22
KO
K06467
CD22 antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117728286 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117728286 (si:dkey-24p1.1)
04090 CD molecules [BR:
clum04090
]
117728286 (si:dkey-24p1.1)
04091 Lectins [BR:
clum04091
]
117728286 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
SIGLEC family
117728286 (si:dkey-24p1.1)
CD molecules [BR:
clum04090
]
Proteins
117728286 (si:dkey-24p1.1)
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117728286 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
Ig_CD22
I-set
ig
V-set
C2-set_2
Ig_4
Ig_5
C1-set
Pam3_gp18
Motif
Other DBs
NCBI-GeneID:
117728286
NCBI-ProteinID:
XP_034385013
LinkDB
All DBs
Position
25:12484800..12492905
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AA seq
613 aa
AA seq
DB search
MNAQTVGWLVFLAIIKNISYGKPMPFQLDVSPLTATEGSCIEIKCTVTQKVHTVSAYWFW
IKDGRWDKVASRVVNGTVIYSTDAAERPVSADFADRVNYIGSPSPSWNSYSATPKSCSIL
ICDLKKTDNGDYSFRFVGKVKWMTRPVRLEVKENPCPITFEEPPAVNEFDTVTLTCSTLM
SCPSNPQIGDLTQLSPTQFSTPQHNNANVKSTTVSLTVRWQDHGKEFSCQTDDRDKYIIR
NISLTVEYAPKDISAQISIKNIVENKSVTLTCSAKGRPDPNFTWFNNRKEVIGTKAVWNI
TSIKESQKGEYICEARNKQGTIKSNPVNIIVTYMPEVEVTSPASTVRQGNKMTLMCNVKR
SNPQPHTYVWSKDGNAIRHKQSQQYVVERIEPEDSGLYKCSASNTVGTRYSKAFNITVEY
GPRKTTISISENDKRVGVGKSLTFYCNTKANPAPVRFSWHRYDSKTQQWKSKTTKEKKLR
LDTVKRADEACYVCNATNHIDTGEDSEPVCIQVLYAPTELALSMDTEVREGGLITIRCTV
ESFPPSTLTLKQISDSNPQTSKLLFTQPDDWVPNTLQHSFNVTSMHTGSYTCHATNSEGS
KTSERRELVVKCE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcagacagttgggtggttggtatttctggcaataataaaaaatatttcttat
ggcaaaccaatgcccttccaactggatgtcagtcccctgacggctacagaggggtcctgc
attgagatcaagtgcacagtcactcaaaaggttcacactgttagtgcatactggttttgg
ataaaggatggacggtgggataaggtagcttcgagagttgtcaatgggactgtcatttac
agcacggacgctgcagaacgtcctgtcagtgcagactttgcagatagagtgaactatatc
ggttctccatctcccagttggaacagttattctgcgaccccaaaaagttgcagtatttta
atctgcgacctaaagaaaacggacaacggagactattctttcagatttgttggaaaagta
aagtggatgaccagaccagtgaggctagaagttaaagagaatccatgcccgatcactttt
gaggaaccacctgccgtaaacgaatttgacaccgtaacactcacttgctccactttgatg
tcatgtccttcaaacccacaaattggagatttgacacaactgtctccaactcagttctca
acgcctcaacacaataatgcaaacgtgaaaagcaccacagtcagtctcactgtacgctgg
caggatcatgggaaggagttttcatgccagacagatgacagagacaaatatataattcgg
aatatcagtttaactgttgaatatgctcccaaagacatatcggctcaaataagcattaaa
aacattgtggaaaacaaatctgtgactctcacttgctccgccaaaggacgtccggacccc
aacttcacatggttcaacaatagaaaggaagtaattggaacaaaggcagtatggaacatt
acgtcaattaaagagtcacagaagggagaatacatttgtgaagctagaaacaaacagggg
acaataaaatcaaacccagtcaatattattgttacatatatgcctgaagttgaggtgacg
tcccctgcttccacagttagacaaggaaataaaatgactttgatgtgtaatgtgaagaga
agcaacccacaacctcacacctacgtgtggtctaaagatgggaacgctattcgtcacaag
cagtcacagcagtacgttgttgagaggatcgagcccgaggacagtggcctctacaagtgt
agcgccagtaacactgtgggtactcgatactcaaaggcatttaacattactgttgaatac
ggcccgaggaagacaaccatttccatcagtgaaaatgataaacgtgtgggagttggtaaa
tctcttacattctattgtaacaccaaggccaatcctgctccggttcgtttctcttggcac
cgatacgacagcaaaacacagcagtggaagtccaagacaactaaagaaaaaaaactacgc
ttggacacagtaaaaagagcggacgaagcatgttacgtgtgcaatgcaaccaaccacatt
gacacaggggaggatagtgagccagtgtgcatacaagtactctatgctcccaccgagctt
gcgctgtctatggacactgaggtcagggaaggggggctcatcaccatcagatgcactgtc
gaaagcttcccgccctcaacgctcaccttgaaacagatttctgactcaaatcctcagact
tcaaaattgcttttcacgcaacctgatgattgggtcccgaacactctgcaacactcattt
aatgtaacgtcaatgcacacgggctcttacacgtgtcacgccaccaacagcgaaggctca
aagacaagcgaacggagggagttggtggtgaaatgtgagtaa
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