KEGG   Cyclopterus lumpus (lumpfish): 117728286
Entry
117728286         CDS       T09199                                 
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22
  KO
K06467  CD22 antigen
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117728286 (si:dkey-24p1.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117728286 (si:dkey-24p1.1)
   04090 CD molecules [BR:clum04090]
    117728286 (si:dkey-24p1.1)
   04091 Lectins [BR:clum04091]
    117728286 (si:dkey-24p1.1)
Cell adhesion molecules [BR:clum04515]
 Immunoglobulin superfamily
  SIGLEC family
   117728286 (si:dkey-24p1.1)
CD molecules [BR:clum04090]
 Proteins
  117728286 (si:dkey-24p1.1)
Lectins [BR:clum04091]
 I-type lectins (Siglecs)
  117728286 (si:dkey-24p1.1)
SSDB
Motif
Pfam: Ig_3 Ig_2 Ig_CD22 I-set ig V-set C2-set_2 Ig_4 Ig_5 C1-set Pam3_gp18
Other DBs
NCBI-GeneID: 117728286
NCBI-ProteinID: XP_034385013
LinkDB
Position
25:12484800..12492905
AA seq 613 aa
MNAQTVGWLVFLAIIKNISYGKPMPFQLDVSPLTATEGSCIEIKCTVTQKVHTVSAYWFW
IKDGRWDKVASRVVNGTVIYSTDAAERPVSADFADRVNYIGSPSPSWNSYSATPKSCSIL
ICDLKKTDNGDYSFRFVGKVKWMTRPVRLEVKENPCPITFEEPPAVNEFDTVTLTCSTLM
SCPSNPQIGDLTQLSPTQFSTPQHNNANVKSTTVSLTVRWQDHGKEFSCQTDDRDKYIIR
NISLTVEYAPKDISAQISIKNIVENKSVTLTCSAKGRPDPNFTWFNNRKEVIGTKAVWNI
TSIKESQKGEYICEARNKQGTIKSNPVNIIVTYMPEVEVTSPASTVRQGNKMTLMCNVKR
SNPQPHTYVWSKDGNAIRHKQSQQYVVERIEPEDSGLYKCSASNTVGTRYSKAFNITVEY
GPRKTTISISENDKRVGVGKSLTFYCNTKANPAPVRFSWHRYDSKTQQWKSKTTKEKKLR
LDTVKRADEACYVCNATNHIDTGEDSEPVCIQVLYAPTELALSMDTEVREGGLITIRCTV
ESFPPSTLTLKQISDSNPQTSKLLFTQPDDWVPNTLQHSFNVTSMHTGSYTCHATNSEGS
KTSERRELVVKCE
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgaatgctcagacagttgggtggttggtatttctggcaataataaaaaatatttcttat
ggcaaaccaatgcccttccaactggatgtcagtcccctgacggctacagaggggtcctgc
attgagatcaagtgcacagtcactcaaaaggttcacactgttagtgcatactggttttgg
ataaaggatggacggtgggataaggtagcttcgagagttgtcaatgggactgtcatttac
agcacggacgctgcagaacgtcctgtcagtgcagactttgcagatagagtgaactatatc
ggttctccatctcccagttggaacagttattctgcgaccccaaaaagttgcagtatttta
atctgcgacctaaagaaaacggacaacggagactattctttcagatttgttggaaaagta
aagtggatgaccagaccagtgaggctagaagttaaagagaatccatgcccgatcactttt
gaggaaccacctgccgtaaacgaatttgacaccgtaacactcacttgctccactttgatg
tcatgtccttcaaacccacaaattggagatttgacacaactgtctccaactcagttctca
acgcctcaacacaataatgcaaacgtgaaaagcaccacagtcagtctcactgtacgctgg
caggatcatgggaaggagttttcatgccagacagatgacagagacaaatatataattcgg
aatatcagtttaactgttgaatatgctcccaaagacatatcggctcaaataagcattaaa
aacattgtggaaaacaaatctgtgactctcacttgctccgccaaaggacgtccggacccc
aacttcacatggttcaacaatagaaaggaagtaattggaacaaaggcagtatggaacatt
acgtcaattaaagagtcacagaagggagaatacatttgtgaagctagaaacaaacagggg
acaataaaatcaaacccagtcaatattattgttacatatatgcctgaagttgaggtgacg
tcccctgcttccacagttagacaaggaaataaaatgactttgatgtgtaatgtgaagaga
agcaacccacaacctcacacctacgtgtggtctaaagatgggaacgctattcgtcacaag
cagtcacagcagtacgttgttgagaggatcgagcccgaggacagtggcctctacaagtgt
agcgccagtaacactgtgggtactcgatactcaaaggcatttaacattactgttgaatac
ggcccgaggaagacaaccatttccatcagtgaaaatgataaacgtgtgggagttggtaaa
tctcttacattctattgtaacaccaaggccaatcctgctccggttcgtttctcttggcac
cgatacgacagcaaaacacagcagtggaagtccaagacaactaaagaaaaaaaactacgc
ttggacacagtaaaaagagcggacgaagcatgttacgtgtgcaatgcaaccaaccacatt
gacacaggggaggatagtgagccagtgtgcatacaagtactctatgctcccaccgagctt
gcgctgtctatggacactgaggtcagggaaggggggctcatcaccatcagatgcactgtc
gaaagcttcccgccctcaacgctcaccttgaaacagatttctgactcaaatcctcagact
tcaaaattgcttttcacgcaacctgatgattgggtcccgaacactctgcaacactcattt
aatgtaacgtcaatgcacacgggctcttacacgtgtcacgccaccaacagcgaaggctca
aagacaagcgaacggagggagttggtggtgaaatgtgagtaa

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