Cyclopterus lumpus (lumpfish): 117728294
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Entry
117728294 CDS
T09199
Symbol
gabbr1a
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117728294 (gabbr1a)
04082 Neuroactive ligand signaling
117728294 (gabbr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117728294 (gabbr1a)
G protein-coupled receptors [BR:
clum04030
]
Metabotropic glutamate receptor family
GABA
117728294 (gabbr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
UPF0242
NEMP
DUF3995
DUF6377
Motif
Other DBs
NCBI-GeneID:
117728294
NCBI-ProteinID:
XP_034385031
Ensembl:
ENSCLMG00005012336
LinkDB
All DBs
Position
25:complement(12154424..12227907)
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AA seq
991 aa
AA seq
DB search
MARILFLMILYALPSLVVPIHNSSTGGCAIIRPPRDGGIRYRGLTQEQIRSVQILPVDYE
IEYICRGNRVIVGPKVRKCLPDGTWTDMTLNSTCLLLCARVWTSLENGRVTAKPPGPPVE
GTVLHYSCHAGFILEGRNISHCTKLGKWDAPKPTCLCKKKLYIGALFPMSGGWPGGQACM
PSAQMALDLVNNRSDILPDYELELIHYDSMCDPGEATKLLYDLLYTEPIKIVLMPGCSGV
STLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVRLFQKWKWTRI
ATIQQTTEVFTSTLDDLEQRTKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIVGLFYET
EARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIKDPAINCTVENMTEAVEGHVTTEIVM
LNPETVRGVSNMTSQEFIAALMSRLGGKNPEDTGGFQEAPLAYDAVWALALALNKTVAPL
KAKGRRLEDFNYNNHDITSEIYRALNTSSFEGVSGQVVFDAQGSRMAMTLIEQLQGGSYK
KIGYYDSSQKNLSWFGNDVWIGAGPPADRTVVIEEYRFLSQKLFAAVSVFAGLGILFGIV
CLTFNIYNGNVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGHHVHRSQFPVVCQFRLW
LLGLGFSLAYGSMFTKIWWVHTLFTKKDEKKEKKKQHLEPWKLYATVGVLLAIDFLSLMI
WQIVDPLHVTVEKFTKEAPKEDLDVLIQPLLEHCSSEKMNTWLGVVYGYKGLLLLLGIFL
AYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDASFAFAALAVVFSAYI
TLVVLFVPKMRRLITRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKIIQEKEE
RVSALRNQLAERQALRNRRRPSSGQNQNHNDPPPSSQPDPKSLLPPPGYPNPPTDNHALP
PSFSNSSSLYPADSKMNRNHCHNSQIPLLYK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaatattgttcctgatgattctctatgctcttccgtctcttgttgtgccaata
cataattcatcaactggaggctgtgccatcatccggcctcccagggacggggggatccgc
taccgaggcctgacacaagaacagatccgcagtgtgcagatcctccctgtggattatgag
atagaatacatctgcagaggaaaccgggtgatcgtgggacccaaggtcaggaagtgctta
cccgacggcacatggacggacatgacgctaaacagcacatgtttgctgctgtgcgcccgg
gtgtggacctccctggagaacggccgggtgacggcgaagccccccgggccgccggtggag
gggacggtgctgcactacagctgccacgccggcttcatcctggagggcaggaacatcagc
cattgcaccaaactgggcaagtgggacgcgcccaagcccacctgcctctgcaagaagaag
ctgtacatcggagcgctgttccccatgagcgggggctggccgggcggccaggcgtgcatg
ccctccgctcagatggccctggacctggtgaacaaccggagcgacatcctgccggactac
gagctggagctcatccactacgacagcatgtgcgaccccggagaggccaccaagttgctg
tatgaccttctgtacaccgagcccatcaagatcgtcctcatgcccggctgcagcggcgtc
tccacgctggtggccgaagccgcccgcatgtggaacctcatcgtgctgtcctatggctcc
agctcgccggcgctgtccaaccgccagcgcttccccacctttttccgcacgcacccatct
gccacccttcacaaccccaccagggtgaggctcttccagaagtggaaatggacccgcatc
gccaccatccagcagaccaccgaagtcttcacctcaactctagacgatctggagcaaagg
acgaaggaggcaggcatcgagatcagcgttcgccagagtttcctcaccgacccggctgtc
gctgtcaagaacctcaagcgccaagatgcgaggatcattgtggggctcttttatgagacc
gaggccaggaaggtgttttgtgaggtgttcaaggagaagctctacgggaagaagtatgtg
tggttcctgataggctggtacgcagacaactggttcaagatcaaagacccagctatcaac
tgtacagtggagaacatgacggaggccgtggagggacacgtgaccaccgagatcgtcatg
ctgaaccccgagacggtccgcggcgtctccaacatgacgtcgcaggagttcatcgccgcc
ttgatgtctcgtctgggggggaagaaccccgaggacaccggtgggtttcaggaggccccg
ctggcctacgatgccgtgtgggctctggccctcgccctcaataagaccgtggcgccgctg
aaggccaagggccggcgcctggaggacttcaactacaacaaccacgacatcacctccgag
atctacagggccctcaacacgagctcctttgaaggcgtttcgggccaagtggtgtttgat
gcccagggatccaggatggcaatgactcttattgagcaactgcaaggaggcagttacaag
aagatcggttactatgacagctctcagaaaaacctttcgtggtttggcaatgatgtctgg
ataggtgctggacctccggcggaccggaccgtggtgatcgaggagtacaggttcttgtct
cagaagctgtttgcagctgtgtccgtcttcgctggcctcggcatcctgttcggcatcgtc
tgcctaaccttcaacatctacaacggcaacgtccgctacatccagaactctcagccgtac
ctcaacaacatgaccgcggtgggatgcatgatggctctggccgctgtgttcccactgggc
atcgatggtcaccacgtccacagatctcagttccccgtcgtctgccagttccgcctgtgg
ctcctcggcctcggcttcagcctggcatatggcagcatgttcaccaagatctggtgggtc
cacaccctcttcacaaagaaggatgaaaagaaggagaagaagaagcaacacttggagcca
tggaaactctacgcaacagttggagtgctgctggctatcgactttctgtcactcatgatc
tggcagattgtggatcctctgcacgttacggtggagaagttcactaaggaggccccgaaa
gaagatttggatgtcctgattcagcccttgctggagcactgcagctccgagaagatgaac
acctggctcggtgtggtttatggctacaaggggctgctgctgctgctgggcatatttctg
gcttacgagaccaagtctgtctccacagaaaagatcaacgaccatcgggccgtggggatg
gctatttacaacgttgctgtgttgtgcctgatcacggctccagtgaccatgatcctctcc
tcgcagcaggacgcctcctttgccttcgcggctctcgcggtcgtcttctcggcctacatc
actctggtggtgcttttcgtacccaagatgcgacgtctcatcacgcgcggcgagtggcag
tcggagcagcaggacactctgaagaccggctcgtccaccaacaacaacgacgaggagaag
tcccgacagctggagagagagaacagggagctgcagaagatcatccaggagaaagaagag
agggtgtcggcgctccgcaaccagctggcggagcgccaggctctgcgcaaccgccgccgt
ccctcctcgggccagaatcagaaccacaacgacccgccgccctcctcccagccggatccc
aagtctctgctgcccccgcccggctaccccaacccccccacagacaaccacgccctccca
ccctccttctccaactcctccagcctctacccggccgacagcaagatgaaccgcaaccac
tgtcacaacagccagatcccactgctgtataagtag
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