Cyclopterus lumpus (lumpfish): 117728311
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Entry
117728311 CDS
T09199
Symbol
tgfb2
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04060
Cytokine-cytokine receptor interaction
clum04068
FoxO signaling pathway
clum04110
Cell cycle
clum04218
Cellular senescence
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117728311 (tgfb2)
04350 TGF-beta signaling pathway
117728311 (tgfb2)
04068 FoxO signaling pathway
117728311 (tgfb2)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117728311 (tgfb2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117728311 (tgfb2)
04218 Cellular senescence
117728311 (tgfb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117728311 (tgfb2)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117728311 (tgfb2)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Transforming growth factors (RSTK binding)
117728311 (tgfb2)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117728311 (tgfb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
117728311
NCBI-ProteinID:
XP_034385057
Ensembl:
ENSCLMG00005007972
LinkDB
All DBs
Position
25:complement(4550879..4613595)
Genome browser
AA seq
422 aa
AA seq
DB search
MGFQPQKMNLCVVSLLLTLDLAAVALSLSTCSTLDMDQFKKKRIEAIRGQILSKLKLTNP
PEDFPEPEEVSRDIVAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKVDMQPFYP
AENVISPTHFNPYFRRLTFDVSSMEKNASNLVKAELRIFRLQNHGARVSEQRIELYQILG
HKDLTSPTQRYIDSKVVRTQTEGEWLSFDVTEAVNEWLNHRDRNSGFKISLHCPCCTFVP
SNNYIIPNKSEELEARFAGIDDSFIHGVDLKVFKKRRHSTRAPHLLLMLLPSYRLEVPVS
SQHTGHRSKRALDAAYCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYEANFCAGACPY
LWSADTQHSKVLGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMKVKSCK
CS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcagccgcagaagatgaacctgtgtgtcgtcagtcttctcctcactctggat
ctagccgccgtggcgctcagtttgtccacgtgcagcacgctggacatggaccagttcaag
aagaagcgaatcgaggccatccgagggcagatcctgagcaagctgaagctcaccaatccc
ccggaggacttccccgagcccgaggaggtgtctcgggacatcgtggccatctacaacagc
acccgcgacctgctgcaggagaaggcgaacgagcgcgcggcgacgtgcgagcggcagcgg
agcgaggaggagtactacgccaaggaggtgcacaaggtcgacatgcagcccttctacccg
gcagagaatgtcatttctccaacacatttcaacccatacttcaggcggctgacatttgat
gtgtcttccatggaaaagaacgcctccaacctggtgaaggctgaacttcggatcttccgt
cttcaaaaccatggggcccgagtgtctgagcagcgcatcgaactctaccagattttagga
cacaaggacttgacatctccaacacagcgatatatagacagcaaggtggtacgaacacaa
acggagggagagtggctatcttttgacgtgacagaggcagtgaatgaatggctaaaccac
agagacagaaacagtggattcaagatcagcctgcattgcccgtgctgcacgtttgtacca
tcaaataactacattattcccaacaagagtgaggagctggaggcacggtttgcaggtatt
gatgacagcttcatccatggcgttgacctgaaggtgtttaagaagcggcggcacagcact
cgggctccacaccttctcctcatgctgctgccttcataccggctggaggtcccagtctca
tcccagcacacaggccatcgatccaagagagcgctggatgccgcctactgctccagaaac
gttcaggacaactgctgcttacggtcactctacatagattttaagaaggacctgggctgg
aggtggatccacgagccaaagggctacgaggctaacttctgtgccggagcctgtccctat
ctgtggagtgcagacacccagcattccaaggtgttaggcctgtacaacaccatcaaccct
gaagcatcggcatcgccatgctgtgtctcccaggacttggagcccctcaccatcctctac
tacatcggcaagacccccaaaatagagcagctctccaacatgaaggtcaagtcctgcaag
tgtagctag
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