Cyclopterus lumpus (lumpfish): 117728316
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Entry
117728316 CDS
T09199
Symbol
tnfb
Name
(RefSeq) tumor necrosis factor b (TNF superfamily, member 2)
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117728316 (tnfb)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117728316 (tnfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117728316 (tnfb)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Tumor necrosis fators
117728316 (tnfb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Peptidase_U4
Motif
Other DBs
NCBI-GeneID:
117728316
NCBI-ProteinID:
XP_034385061
UniProt:
A0A6B9RC95
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Position
25:12151784..12153349
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AA seq
254 aa
AA seq
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MVAYTTAPGDVEMGFDQRMVVLVEKKSSTGPMWKVAVALFIVALCLGGVLLLAWYWTGKT
DLMTQSGHTEALIKNDTAEKTDPHTTLRQISSKAKAAIHLEGSCEEDSEGLQGQLEWRSG
QGQAFAQGGFRVENNRIVIPHTGLYFVYSQASFRVSCSDGEEEEAGRRHAPLSHRIWRYS
DSLGRKASLMNAVRSACQNTAQEESYRDGQGWYNAIYLGAVFQLHKGDQVWTETNQLSEL
ETEDGRTFFGVFAL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggtggcctacacaacagcaccaggtgacgtggagatgggctttgaccagaggatggtg
gtgttggtggaaaagaagtcctccacagggcccatgtggaaggtggccgtggcccttttc
atcgtggccctttgcctggggggagtcctgctgctggcttggtactggactggaaagacc
gacttaatgacacaatcaggccacacagaagctctaatcaagaatgacactgctgagaaa
acagatccccacaccacgttgaggcagatcagcagcaaagccaaggcagccatccattta
gaagggagctgcgaagaagacagcgaggggttgcaaggccagctggagtggagaagcggt
caaggccaggcgttcgctcagggcggcttccgagtggagaacaaccggatcgtcatccca
cacaccggcctctacttcgtctacagccaggcgtcgttcagagtgtcctgcagcgatggc
gaggaggaggaggcgggccggcgccacgcgcctctcagccacaggatctggcgctactcg
gactccctcggcaggaaagcctcgctgatgaacgcggtgaggtcggcgtgtcaaaacact
gcccaggaggagagctaccgagacggacagggctggtacaacgccatttacctgggcgca
gtgtttcagctgcacaaaggagaccaagtgtggacggaaaccaaccagctatcggagctg
gagaccgaggatggccggaccttcttcggcgtgtttgcactttga
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