Cyclopterus lumpus (lumpfish): 117728593
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Entry
117728593 CDS
T09199
Symbol
ntn1a
Name
(RefSeq) netrin-1a
KO
K06843
netrin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117728593 (ntn1a)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117728593 (ntn1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
117728593
NCBI-ProteinID:
XP_034385187
Ensembl:
ENSCLMG00005007655
LinkDB
All DBs
Position
1:complement(6727763..6778793)
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AA seq
606 aa
AA seq
DB search
MQRAVDIALTVLLAASLSCRSALGGYGVSLFAAQTSPPDPCYDEHGNPRRCIPDFVNSAF
GKEVKVSSTCGKAPGRYCVVTAAEKGDERTRNCHTCDASDPKKGRPPAYLTDLNNPHNLT
CWQSENFVQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVIYKSMDYGKTWVPFQSYS
TQCRKMYNKPNRAVITKQNEQEAVCTDSHTDMYPLTGGLIAFSTLDGRPSAHDFDNSPVL
QDWVTATDIKVIFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDR
DGGLVCECKHNAAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKAISHRKACKACDCHPVGAAGKTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTPSSSTEEPSDCDSYCKA
SKGKLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVR
AKDVACKCPKIKPGKKYLLLGNDEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKK
GKCKKP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagggctgtggacattgcgctgactgtgctgctcgccgcgtccctgtcgtgccgg
agcgccctcggcggctacggggtgagcctgttcgcggcgcagacctcccccccggaccct
tgctacgacgagcacggcaacccgcgccgctgcatcccggacttcgtcaactccgccttc
ggcaaggaggtgaaggtgtccagcacctgcggcaaggcgcccggccgctactgcgtggtg
acggcggcggagaagggggacgagcggacgaggaactgtcacacctgcgacgcctcggac
cccaagaagggccgcccgccggcgtacctgacggacctcaacaacccgcacaacctcacc
tgctggcagtccgagaacttcgtgcagtacccgcagaacgtcacgctgaccctgtcgctc
ggcaagaagttcgaggtcacctacgtgagcctgcagttctgctcgccccggcccgagtcc
atggtgatctacaagtccatggactacggcaaaacctgggtgccctttcagtcctactcc
acccagtgcaggaagatgtacaacaagccgaaccgggccgtgatcacgaagcagaacgag
caggaggcggtctgcacggactcgcacaccgacatgtaccctctgaccggcggcctcatc
gccttcagcacgctggacggccggccgtcggcgcacgacttcgacaactcgcccgtgctg
caggactgggtgacggccaccgacatcaaagtcatcttcagccggctgcacacgttcggc
gacgagaacgaggacgactcggagctggcgcgcgactcgtacttctacgccgtgtcggac
ctgcaggtcggcgggaggtgcaagtgcaacgggcacgcgtcccggtgcgtaaaggaccgg
gacgggggtctggtgtgcgagtgcaagcacaacgccgccgggccggagtgcgacaggtgc
aagcctttccactacgacagaccgtggcagagagccacggccagggaggccaacgagtgc
gtcgcctgcaactgtaacctccacgcccggaggtgccgcttcaacatggagctgtacaag
ctgtcggggaggaagagcggcggcgtctgcctcaactgtcgccacaacacagccgggcgc
cactgccactactgcaaggagggctactacagagacctgtccaaagccatctcacacagg
aaggcatgcaaagcatgtgattgccatcccgtgggcgctgctggcaaaacctgtaaccaa
accacaggacaatgtccctgtaaagacggcgtgaccggtatcacgtgcaaccgctgcgct
aaaggctaccagcagagccgctcgcccattgccccctgcataaagattccagttgcacct
cctacgaccccgtccagcagcacagaggagccgtcagactgtgactcgtactgcaaagcg
tcgaaaggcaagctgaagatcaacatgaagaagtactgcaagaaagattacgctgtccag
gtgcacatcctgaaggcggacaaggccggcgagtggtggaagttcaccgtcaacatcatc
tccgtctacaagcagggcgagagccgcatccgccgcggcgaccagttcctgtgggtccgc
gccaaggacgtggcctgcaagtgtcccaagatcaagcccgggaagaagtacctgctgctg
gggaacgacgaggactcccccggccagagcggagtggtggcggacaaaggcagcctggtt
atccagtggagggacacgtgggcgcgcaggctcaggaagttccagcagcgtgagaagaaa
ggcaagtgcaagaagccatag
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