Cyclopterus lumpus (lumpfish): 117728607
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Entry
117728607 CDS
T09199
Name
(RefSeq) general transcription factor IIF subunit 2-like isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117728607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117728607
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117728607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Motif
Other DBs
NCBI-GeneID:
117728607
NCBI-ProteinID:
XP_034385208
Ensembl:
ENSCLMG00005004188
LinkDB
All DBs
Position
3:complement(9384500..9390269)
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AA seq
270 aa
AA seq
DB search
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKATGRGDVGKLRICKKGNQGKAEVSFTL
NEELTVIDGIEDKTVSAPRDHPFTMQTVGGQMLAVFTENSSGQSEERSDGSSSVSGAGAG
PDKIALEGVVVQRAECRPAVSESYMRLKRLQIEELAKPVRLSQQLDRVVTSNYKPVANHT
YNLEYERKKKEDGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDI
GIYNVKGTHKNTWELKPEYRHYQGEEKTDE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaaaggagaggtggatttaactggtgccaagcagaacacgggtgtgtggctt
gtgaaggtacccaaatatctctctcagcaatgggcgaaagcgacgggcagaggggacgtc
gggaaactccgaatatgcaagaaaggaaaccaaggaaaagcagaggtgtctttcactttg
aatgaagagctgaccgtgatcgacggtatcgaagacaagacggtgtcggcgcctcgcgac
cacccgttcaccatgcagacggtggggggtcagatgctggcggtcttcacagagaactcg
tcaggccagtcagaagaaagatctgatggcagcagctcagtttcgggggcgggggcaggt
ccagataaaatcgccttggagggagtggtagtgcagagagcagagtgcagacctgctgtt
agtgaaagctacatgaggctgaagaggttgcagattgaagagttggccaagccggtccgg
ctgtcacaacagttggatagagttgtcaccagcaactacaaaccggtggccaaccatact
tacaatcttgagtatgagcggaaaaagaaggaggacggaaagagagcaagagcagataaa
cagcaggtgttggacatgttgttttctgcttttgagaagcatcagttctacaacatcaaa
gacctggtggacatcaccaaacagcctgtgatttacttgaaggaaatcctgcgtgacatt
ggcatctacaatgtgaaggggacgcacaagaacacctgggagctcaaaccagaataccga
cattaccaaggcgaggaaaagaccgacgaatag
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