Cyclopterus lumpus (lumpfish): 117728610
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Entry
117728610 CDS
T09199
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117728610 (irx6a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117728610 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117728610
NCBI-ProteinID:
XP_034385211
Ensembl:
ENSCLMG00005008788
LinkDB
All DBs
Position
3:complement(21909204..21913095)
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AA seq
502 aa
AA seq
DB search
MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGGSQTAAASFCCPSY
ENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSTLNPQYDIKDST
GTLHAGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKATDDRKDDFNKSDQ
DCVTKDSIDCKEEKDLHLSDLEDMDDDDDCDKLDSDCEKVAADEQDLQRVMAVSGAPQKR
DCASELHMSLTNSFHAFPCSIKSVSTLPPLPSDFLDPAASKAPSSTGPAGTMSLSHFEAS
DKPRIWSLARTAASGVILSPQQHGSELRTGNSTGDCQLQSTRLTGQCGGMRGLHESSSVT
NAESPFPEGLSLHSKVYGTGSYSHKDLQLHCSSYANLPDSCQYSSIEGFSGGKAETQSSD
LSEACRTVQDDKVTAFRPVMKR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcaatttggatacccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgatgggacaggcggctcccagaccgccgctgcctccttctgctgcccgtcctac
gagaatcggctcctggcgagcagccggacggagctgaacgcagcgctggggatgtacagc
tctccctacgccgcagcggctgccgccagccagaactacgccaactacttcccctacagc
accgatccatccgctatctactccactctgaatccacagtatgacattaaggacagcaca
ggcactttacacgctggcatcactcaaaccgctgcatactatccttacgaccattcgctg
ggacagtatcaatatgacagatacggcactgtagactttaatggcacagccagaagaaag
aacgcaactcgtgaaaccaccagcaccctgaaaacatggttgtatgagcaccgcaagaac
ccctaccccaccaagggcgagaagatcatgctggctatcatcaccaagatgaccctcacc
caggtgtccacctggtttgccaacgccaggaggaggctaaagaaggagaacaagatgacc
tggtcaccaaagaacaaggccactgacgacaggaaggatgactttaacaagagcgaccaa
gactgtgtcaccaaagattctattgattgcaaggaggagaaggatctgcacctgagtgat
ctggaggacatggacgacgacgacgactgcgacaagttggacagtgactgtgaaaaggtg
gctgcggatgagcaggacctccagagggtcatggcggtatccggagcccctcaaaagaga
gactgcgcctccgagctgcacatgagtttaaccaacagcttccacgcgttcccctgcagc
atcaaaagtgtcagcaccctccctcctctcccgtccgacttcctggaccctgcggcgtcc
aaggcaccgtcttcgaccggccccgcaggaactatgtccctgtctcactttgaagcatca
gataagcctcggatttggtctctggctcgcacggcagcttcgggggtcatactgagccct
cagcagcatggctcggagctgaggacaggtaactcaaccggggactgccagctccagagc
accaggcttactggacagtgtgggggcatgagaggcctccatgaatctagcagtgtcacc
aatgctgagagtccattccccgagggcttatccttgcactcaaaagtctatggcacaggc
agctacagtcacaaagacctccaactgcactgttcctcctatgctaacctcccggactca
tgtcagtactcctctattgaaggattctctggtggcaaagcagagacacagtcatctgac
ctcagtgaagcctgcaggaccgtgcaggatgacaaggtcactgcgttcagaccagtgatg
aagaggtga
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