Cyclopterus lumpus (lumpfish): 117728661
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Entry
117728661 CDS
T09199
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117728661
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117728661
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
IQ
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
117728661
NCBI-ProteinID:
XP_034385323
Ensembl:
ENSCLMG00005007081
LinkDB
All DBs
Position
3:complement(20140302..20166262)
Genome browser
AA seq
1257 aa
AA seq
DB search
MQKGMRLNDGHITYLALLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKLSLSAKECLEKQYYFTVTFNHDNQKALELRTEDVKDCDEW
VAAITQASYRNLATEHETLMQKYLHLLQIVETEKMVAKQLRQQIEDGEIEIERLKSEIAG
LLKNNEKIQSNPEVPPSEDDTEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVISLIDCTLMEEPEGTDDECKLQS
KDIEHLDFKVMVEPKDVQPFTVILVPSSRQEKSAWTSDISQCIDNIRCNGLMMNAFEENS
KVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFLNT
FLHSYRVFSSADVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPTSPRASRK
FSSPPPLSITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSPNGYASMHSTMSPFSKTT
LDINKLYVSSTMASKIPDEGETKADGKAEESVLNKQDLSVREECDEDPRQSEEVEAEMSP
PKSPSTPKNVKSKNSGAFSLFSFNNGMVVSSCRELDNNRSALSAASAFAIATAGANEGTP
TKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNTCGLKM
RVIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQVTLEEIRQMAMEDCKTEPFES
HSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNKIATE
ILQWDDVNMRVAVIEKWVAVADICRCLHNYNAMLEITSSLNRSSVFRLKKTWLKVSKQTK
TVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDSLVNFS
KMRMISHIIREIRQFQQTAYKIDYQPKVAKYLLDSSTTLDEESLYDASLRIEPKTLS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagggatgagactcaacgatggccacatcacctatctggctcttttggcgaag
aaggatgggaccaggcgaggttgcctgagtaagaaaagctcagacaacacaaaatggcat
tcaaagtggttcgctttgttgcagaacatgctgttttatttcgagaacgactccagctca
cgcccctccggactgtacctgttggagggatgcgtttgtgacagggcaccgtcaccgaaa
ctatccctctcagcgaaggaatgcttagagaagcagtactactttacagtcacgttcaat
catgacaaccagaaggctttggagctgcgcacagaggacgtcaaggactgtgatgagtgg
gtggctgccatcacacaggccagttacaggaacctggctacagagcatgagaccctcatg
cagaagtatctccatctactccaaatagtggagacggagaaaatggttgccaagcaactt
cgacaacagatagaggatggggaaatcgagatagagcggctaaaatcagagatcgctgga
ctgctgaagaacaatgaaaagatccagtcaaatccagaggtgcctcccagtgaagacgac
acagaaatcaagaagatcaaaaaggtccagagtttcctacgaggttggatttgccgcagg
aagtggaaaaccatcatccaggactacatccgttcaccccacgctgaaagcatgaggaag
aggaaccaggtggtgtttagcatgctggaggccgaggccgaatacgtccagcaactccac
atcctggtcaacaacttcctacggccactgcgcatggccgccagctccaagaagccaccc
atcactcacgatgacgtcagtagcatcttccttaacagtgagaccatcatgttcctccat
cagatcttctaccagggcctgaaggcccggatagccagctggccgacacttgtgctggcg
gacctgtttgacatcttgctgcccatgctcaacatctaccaggagtttgtgaggaaccat
cagtacagcctgcagatcctggcccactgcaaacagaaccgggacttcgacaagctgctg
aagcagtacgaggccaagcccgactgtgaggagaggacactggagacctttctcacttac
cccatgtttcagatccctcgttacattctgacgctgcatgagttgctggctcacaccccc
catgagcatgtagagagaaacagtttggactacgccaagtcaaaactggaggagctttcc
agaatcatgcatgatgaggtgagcgagacagagaacatcaggaagaacttagctattgag
cggatgattgtggagggttgtgaagtgctgctggacaccagtcagacgtttgtcaggcaa
ggttccctgatccaggtgccgatgagcgagaaagggaagatcacgagaggccgactgggc
tctctgtctctgaagaaagaaggcgagagacagtgtttcctcttctccaaacatctcatc
atctgtacccgcggctccgggggaaaactacacatcactaagaatggagtgatctctctc
atcgactgcacactgatggaggagccagaggggacagatgatgagtgtaagttacaatcc
aaggacatagagcacctggactttaaagtgatggtggagcccaaagacgtccagcccttc
accgtcatcctggtgccttcgtcccgacaggagaaatcagcgtggacaagcgacatcagc
cagtgcattgacaacattcgctgcaatggtctgatgatgaacgctttcgaggaaaacagt
aaagtcaccgtgccacagatgattaagtcggacaccagcttgtactgtgatgatgtcgac
attcgcttcagcaagatgatgaactcctgcaaggtgctgcagatccgctacgccagcgtt
gagcgtttgttggagaggctgactgacttgcgcttcctctccatcgacttcctgaacact
ttcctccactcctaccgtgtcttcagcagtgctgacgtcgtgctggacaagctcatcacc
atctacaagaagcccatcagtgctatccccgcacgttctttggagcttttctttgccagc
agccagaacaacaaactcctctacggcgagccacccacgtcgccacgtgccagccgcaag
ttctcctcccctcctccgctctccatcaccaagacgtcctcgcccaaccgccgtcgcaag
ctttcgctcaacatccccatcatcacagggggcaaagccctggacctggctgcactcagc
tgttctcccaatggctatgcaagcatgcactccaccatgtcacccttcagtaagaccacc
ctcgacattaacaagctttatgtgtctagcaccatggccagcaaaatccccgatgaggga
gagaccaaagccgacggcaaggcggaggagtctgtcctcaacaagcaagatctgtccgtg
agagaggaatgtgatgaggatccaagacagagtgaggaagtagaagcagaaatgtctcct
cccaaatcaccatcgacacccaagaacgtcaagtccaaaaactctggtgcgttttccctg
ttttccttcaacaatggcatggtggtgtcctcttgccgggagctggacaacaaccgcagt
gccctctctgcggcctcggcctttgccatcgccacggctggtgccaatgaaggcacgcca
accaaggagaagtatcgccgcatgtcgctcgccagcacaggttttccaacagaccagagg
aatggggacaaagagtttgttatcaggagagctgccacaaaccgagtcctgaatgtgctg
cgtcactgggtctccaagcactcacaggactttgagctcaacacatgcgggctaaagatg
cgggtaattggcttcctggaggaggtgatgcatgacccagagctcctgacacaagaaaga
aaggcagctgccaacatcatcaggactctcactcaggaggaccctggagacaaccaggtc
acactggaagagatcagacagatggccatggaagactgtaagactgagccgtttgagagc
cactccgccctggagatcgctgagcaactcacactgctggaccacctggtcttcaaggtc
atcccatatgaggagttctttggtcaaggctggatgaagaacgacaagaacgagagaact
ccctatattatgaagacaaccaagcatttcaacgatatcagcaacaagattgccacagag
atcctgcagtgggatgatgtcaacatgcgagtggcggtgatcgagaaatgggtggcagtg
gctgacatctgtcgctgcctccacaactacaacgccatgctggagattacgtcctctctc
aatcgcagctccgtcttccgcctcaagaagacctggctcaaagtctccaagcagacaaag
accgtgattgacaagttacaaaagctggtgtcatcagaagggcgattcaaaaacctgaga
gaagctctgaagaactgtgaccctccctgtgttccctacctgggaatgtacctgactgac
ctggccttcatcgaggagggaacgcccaactacaccgaggacagcctggttaacttctcc
aagatgagaatgatatctcacattatcagagaaatacggcaatttcagcaaacggcttac
aagattgattatcaaccaaaggtcgcaaagtacttgctggacagcagtacaacgctggat
gaggaaagcctgtatgacgcgtctctgagaatcgagcccaaaactttatcatga
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