Cyclopterus lumpus (lumpfish): 117728704
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Entry
117728704 CDS
T09199
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117728704 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117728704 (abcb10)
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117728704 (abcb10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA
Zeta_toxin
DUF87
AAA_21
AAA_29
AAA_25
AAA_14
RsgA_GTPase
nSTAND1
AAA_33
T2SSE
AAA_5
P-loop_TraG
nSTAND3
AAA_7
Motif
Other DBs
NCBI-GeneID:
117728704
NCBI-ProteinID:
XP_034385384
Ensembl:
ENSCLMG00005015286
LinkDB
All DBs
Position
3:complement(18048422..18058447)
Genome browser
AA seq
716 aa
AA seq
DB search
MQLLICLSRCSHGAHVSKLKPTQPRTLWLQHRPTPSAALRRKRLSTGVTSSGSPTPAFLL
SSSGPFVSVWPCSPLRGLSILRSHTPTGRPVTHTPVAFATSSAGSVKTQTDTESGQTPTT
VPLDDVKRILQLAHPERWSLAAALGFLTVSSAVTMSAPFLLGKVIDTIYTTGTDTETMTA
SLTSLCIMLTGVFLCGAAANAARVYLMQTSGQQIVRNLRAAVFSSILRQEVAFFDRNRTG
ELINRLSADTGVVGRSITDNLSDGLRAVAQAAAGVSMMFYVSPSLASFVLLIVPPVAGLA
VVYGRYLRSISKCTQDALAQATQLAEERISNLRTVRAFGKELSEVNAYTQKTDQVLSLAR
KEAVLRAGFFGVTGLSGNIMILSVLYKGGLLMACQHMTVGELSSFLMYTFWVGISIAGLS
SFYSELMKGFGAGTRLWELLDRKPEFPLNEGLVLPPDQLKGQLEFSDVSFAYPTRNEAPI
FQNLSLLVPAGTIMAVVGPSGSGKSTLVSLLLRLYDPEAGIITIDGHDIRELNPYWLRSH
IGTVSQEPVLFSCSIRDNIAYGAVDPDAVTTEDIYTAARVANAFNFIQDFPQGFDTIVGE
KGVLLSGGQKQRIAIARALIKNPKILLLDEATSALDAENEFLVQEALERLMEGRTVVIIA
HRLSTIQNANAVAVLDQRRIAECGQHTELLGNRQGLFRKLMEKQAFLQDEQQQALR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcttaatttgcttgtcgaggtgctcgcatggagcgcatgtgtccaaactcaag
ccaacgcagccgaggacgttgtggctgcagcaccgtccgactccctcagctgccctccgg
aggaagaggctgtcgaccggggtcacgtcgtcaggcagcccgacacctgccttcctgctc
tcctcttccggccccttcgtgtctgtctggccctgcagtccactcagaggtctctccata
ctccgttcacacacaccgacaggccgaccagtcacacacacacctgttgcctttgccacc
tcgtcagccggatcagtgaagacccagacggacacggagagcggccaaacgccgaccacg
gtccccctggatgatgtgaaaaggattttgcaacttgctcacccggagagatggagcctg
gcagctgctttgggcttcctaacggtctccagtgctgtaaccatgtcagctccattcctc
ctgggtaaagtgattgacaccatctacactactggaacggacacagagacaatgaccgcc
tccctgacatcattatgtatcatgctgacgggagtgttcctgtgtggtgcggcagccaat
gctgccagagtctacctcatgcagacctcaggccaacagattgttcgcaatctccgagcc
gccgtcttctcctccatcctcagacaggaagtggcattttttgacaggaataggaccggc
gagctcatcaaccgcctctctgctgacacaggcgtggtgggccgctccatcactgacaac
ctatccgatggactgagagccgtcgcccaggcagctgctggcgtcagtatgatgttctac
gtctctcccagtcttgcgagctttgtgttgctgattgttcctcctgtggccggtctggct
gtagtctatggccgataccttcgttccatctccaaatgcacacaggacgcactcgctcaa
gccacacagttggcagaggagcgtatcagcaacttgcggacggtccgagcttttggtaaa
gagctgtcagaagtcaacgcgtacacacagaagacagaccaggtcctcagcctggcccgg
aaggaagctgtactacgagcgggcttctttggagtgactggactcagtggtaacatcatg
atcctgtcagtgctgtacaaaggaggcctcttaatggcctgccagcacatgacggtggga
gagctgtcgtcgttcctcatgtacaccttttgggtgggcatcagcattgcaggtctgagt
tcattctactctgagctgatgaaggggtttggagcaggaaccagactgtgggagctgctg
gacaggaagcctgagtttcctctaaatgaaggccttgtgcttcctccagaccagctgaag
ggtcagttggagttctctgatgtctcctttgcctatccgacccgtaacgaggctcctatt
ttccagaacctcagtctgttggtcccagctggtaccatcatggctgtggtgggacctagt
ggctctggaaaatcaaccctggtctcactgctgctcaggctgtacgaccccgaagcgggt
atcatcactatagatggtcatgacatcagagaactgaatccctattggctcaggagtcac
ataggaactgtcagccaggagccagtgctgttttcttgctccataagagataatattgca
tatggcgcagtggacccagacgctgtgaccacagaggacatctacacagcagccagagtg
gccaacgcctttaatttcatccaggattttcctcagggctttgacactatagtgggggag
aaaggagtgctgctgtcaggagggcagaagcagaggatagcaatagccagagctctgatc
aaaaatcctaagatcctgttgttagacgaggctaccagtgcactggatgctgagaatgag
ttcctggtccaggaggccttggagcgtctgatggaagggaggacagtcgtaatcatcgct
caccgtctgtccaccatccagaatgcgaacgccgttgctgtactggaccagcggcgtatt
gctgagtgtgggcagcacactgagctgctgggcaacaggcaagggctgttcagaaaactg
atggagaagcaggcgtttctccaagatgagcagcaacaagcacttcgctga
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