Cyclopterus lumpus (lumpfish): 117728705
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Entry
117728705 CDS
T09199
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117728705 (ppfibp2a)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117728705 (ppfibp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117728705
NCBI-ProteinID:
XP_034385385
Ensembl:
ENSCLMG00005000991
LinkDB
All DBs
Position
3:complement(16761505..16780878)
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AA seq
982 aa
AA seq
DB search
MASNASHMLEAALEQMDDIIAGNMGQGLFGARMQLGGQDCKASECSSQLTPAPLEDPALR
ALQLTEGLRAVLEGQGSEEQQDSLRKQVSTDTAHVILKWLERDEVNLHSSGNSESYQERL
SRLEGDKESLILQVSVLTDQVEAQWAKISDLQSSLLGHQHKLNSTEEMLQQELLHRTSLE
NQKLNLLGEVSYLKLKLADMEGKQGHGAERQHKAETVVNFISELQEQMCRFQKEINSKIQ
EKKALELEMPADSSSPVVRPTESTKGVGSNPWPSCGRTSEEVPEGPDGNTHSLEEGSSDA
DQQDDCGETGLLKELRILKDKVEHLEDQKLQYEKKLKATKAEISGLQQLLLSKNVEIESL
HTQLLARPSLFPESPERDQELQRLRSGMKSLVAANDEKDRRIEELTLLLNQCKQFREVTH
TARRAPPAVRSLSNGRTVSSSSEEEENVLMKNTDSASAKSVDVKSEVSTSSSSSQQTSTS
STQKDSDYRTDPKTSSSCINGLTNGPLQKSGLDDPRSQMLPVNSSLSEQNVSGDSSSEIQ
SHKSLDGSEDGDSSQRKFEKVDDSTSGNNSPVHSGANTQPDQRAVGSSEYMKNNRSFKRL
WGKLRRTQSGGLQAVDPDVSHFRRGGLRATAGPRLTRTPESYDSTRDMNVPFSQWTKEQV
CGWLEDYGLGQYVNLTRQWVENGQTLLSATPQDFEKEMGMKNPLHRKKLQLALKAFTTKV
IEKSADLDYIWVTRWLDDIGLPQYKDHFHEARVDGRMIQYITVNDLLTLKVTSQLHHLSI
KCAIHVLHANKFNPNCLRRRPGEEKQPSPSEVVQWSNHRVMEWLRAVDLAEYAPNLRGSG
VHGGLIILEPRFSAETLALLLNIPPQKTLLRRHLATAFSTLVGHQATQEKREYGNATGHM
PLTTTAKVKPKKLGFTQFSHLRKRKPDESADYICPIDSGALTVNGVSRVPSAALRGLGPA
LDRQAVKQEQVGIKAQTNGPKQ
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaatgccagccacatgttggaagctgccttggagcaaatggacgacattatt
gctggcaacatgggccaggggctgtttggtgctcgtatgcagttaggtggccaggactgc
aaagcctcagagtgttcctcacagttgacccctgccccactcgaggacccggcccttagg
gctcttcagctgacagaaggcctcagggcagtgctggaggggcaggggagtgaggaacaa
caggactctctcaggaaacaagtctccactgatacagcacacgttatactaaaatggctg
gagagagatgaggtaaacctccattcatctggcaatagtgagtcctaccaagagcggtta
tcacgtctggaaggagacaaagagtcactaattcttcaggtgagtgtgctgacagaccag
gtggaagctcagtgggccaagatcagcgatctgcaaagttctctgctggggcatcagcac
aaactcaactccacagaggagatgctgcagcaggagctcctgcataggacgtcactggag
aaccagaagctgaatcttttgggggaggtgtcctacctgaaactaaagctagcagacatg
gaggggaagcagggccatggggctgaaaggcaacacaaagcagagactgttgtaaatttc
attagtgagctgcaggagcagatgtgtaggtttcagaaggagatcaatagcaagatacag
gagaaaaaggccttggagttggagatgccagctgacagcagctctccagtggtgcgcccc
actgagtccaccaagggcgtgggctcaaacccctggccgtcctgtggcagaacctcagag
gaggttccagaagggcccgatgggaacacacacagcctggaagagggtagctcagatgca
gatcagcaggacgactgtggagaaactggcttacttaaagagctcaggattctcaaggac
aaagtggaacacctggaggaccaaaagttacagtacgagaaaaagctcaaagcaacaaag
gcagagatcagcggccttcagcagcttctgctcagtaagaacgtggagatcgagagcttg
cacacacagctgctggccagaccctctcttttccccgagagcccggagagagatcaggag
ctgcagaggcttcggagtggaatgaaatcactagtagctgccaatgatgaaaaggaccga
cgaattgaagagctcactttgctcctgaatcagtgcaagcaattcagagaggtcactcac
acagcaaggcgagctccacctgctgttcgttcattgtcaaatggcaggactgtgtcaagc
agcagtgaggaagaagagaatgtgctgatgaagaatactgactcggccagtgcaaaatct
gtggatgtcaagtctgaagtttccacaagcagctcttcatcccaacaaacatctacttca
tcgacccaaaaggacagtgattacagaacagatccgaagacttcatcaagctgcataaat
ggcctaacaaatggacctttacaaaagagtggtctggatgaccctagaagtcagatgctg
cctgtgaattcctctctgtcagagcagaatgtgagtggagacagcagcagtgaaatccag
agtcataagtctctagatgggagcgaagatggagactccagccaaagaaaatttgagaaa
gttgatgacagcacttcaggcaataattcccccgttcattctggagcaaacacacagccc
gaccaacgagctgtgggctcatcagaatacatgaagaataacaggagcttcaagagactc
tggggaaaacttcgaagaacccagtctggagggctacaggcagtagatccagatgtcagt
cactttagaagagggggactacgtgcaacagcaggacccagactgaccaggacccccgaa
tcttatgactctacacgtgatatgaacgtcccatttagccagtggaccaaagagcaggtg
tgtggctggctagaggactatggactgggccagtatgtcaatctcacgaggcagtgggtt
gaaaatggacagacgctgctgtctgccacacctcaggactttgagaaggaaatgggtatg
aagaatccactgcacaggaagaagctgcagctcgctctaaaggcattcaccactaaagtt
atagagaaatcggcagacttggactacatctgggtcacccgttggttggatgatattggt
ttgcctcagtataaagaccacttccatgaggcccgagtggatggtcgaatgatacaatac
atcacagtgaatgacctcttgactctgaaagtcaccagtcagcttcatcatctcagtatt
aaatgtgccatccatgtccttcatgccaacaagttcaaccccaactgtcttcgacgtagg
ccaggggaagagaaacagccctctccctcagaggtggtgcagtggtctaatcaccgggtt
atggagtggctgagggcagtggatctagctgagtacgctcctaatctacgcggcagtggc
gttcacggtgggctgattatcctggagcctcgcttcagcgcagagactttggcgctgctg
ttaaatattcctccacaaaagactttgctccgccgccacctcgccactgccttttctacc
ctggtgggacatcaggccacgcaggagaagcgagagtatggcaatgccacaggccatatg
ccgctgactaccaccgctaaagtaaagccaaagaagctgggcttcacccaattcagtcat
ctcagaaagaggaaacctgatgaatctgcagactatatctgtccaatagacagtggagct
ctgacagtgaatggggtttctcgcgtgccctctgcagcgctcaggggcctcggccccgcc
ttggacagacaggctgtgaagcaggagcaggtggggataaaagctcaaactaatggccca
aaacaataa
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