Cyclopterus lumpus (lumpfish): 117728757
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Entry
117728757 CDS
T09199
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117728757 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117728757 (nob1)
03051 Proteasome [BR:
clum03051
]
117728757 (nob1)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117728757 (nob1)
Proteasome [BR:
clum03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117728757 (nob1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
WRNPLPNID
Zn_ribbon_NOB1
DZR_2
Zn_Ribbon_1
HypA
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
117728757
NCBI-ProteinID:
XP_034385481
Ensembl:
ENSCLMG00005018384
UniProt:
A0A8C3G705
LinkDB
All DBs
Position
3:31137458..31150116
Genome browser
AA seq
462 aa
AA seq
DB search
MAATLVAHVVADAGAFLKKAPLQDIGSNIYTLRDVVNEIRDKPTRKSLAFLPYQLTFKEP
HPEHVRLVTEFSKKTGDYPSLSATDIKVLALTYQLELEHVGSQHLKKEPEVKVDVHSTQR
HPETPVNVAGFHFPSKKHVDSLSVQQTETSSNDEFNSFQFWREPLPSIDTQLLELLDPVA
VSNPEVHQNQTSAAAGDEFNSFQFWREPLASIDCLLGLLKVDDVATSQSRSDTPLQTEDQ
SDDEDKENEPEEEGGGGWITPSNIRQVKMDSADWTAPADVKVGCLTTDFAMQNVLIQIGL
HVLSVNGMLIKQARNYILRCHACFWTTSIMNKVFCPHCGNPTLKKVAVTLGQDGSTKMHF
SKNPKVLNPRGLRHSLPLPQGGKHSNNPQLVEDQSFPQQRLSRKARQKTDVLDPDYAAGA
SPFCQNDIYSRAANLQIRDGRGGGGRRRSNPNAAHKKFVKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccctggtggcgcatgttgtcgcggacgctggagcctttttaaagaaagct
ccgctgcaggacattggcagcaacatctacacattgagagatgtggtgaatgaaatcaga
gacaaacccaccaggaagagcctggccttcctgccgtaccagctgacctttaaggagcca
catcctgagcacgtccggctggtgacagagttctccaagaagactggagactacccgagt
ctgtccgccacagacatcaaagtgctggctctgacctaccagctggagctggagcacgtc
ggctcccaacacctgaagaaagagccggaggtcaaggtggatgttcacagcacacagcgc
cacccagagactccagttaatgtagcagggttccacttcccctccaagaaacatgtggac
agtctgagcgtccaacagacggagacatcaagcaatgacgagttcaacagcttccagttc
tggagagaaccgctgccgtccatcgacacccagctgctggagctcctggatccggtggca
gtttcaaacccggaggtccatcagaaccagacgtctgcagctgccggtgacgagttcaac
agcttccagttctggagagaaccgctggcgtccatcgactgtctgctgggtctgctgaaa
gtggacgatgtcgccacatcgcagagcaggtcggacacgcctctgcaaacggaggaccaa
tcggacgacgaagacaaagagaacgagcctgaagaggagggagggggcggatggatcact
cccagtaatatcagacaggtgaagatggactccgctgattggacggctccggctgatgtt
aaagtgggatgtcttaccaccgacttcgccatgcagaacgttctcattcagatcggtctt
catgttctctctgtcaacgggatgctgatcaagcaggcgaggaactacatcctgagatgt
cacgcctgcttctggacgaccagcatcatgaacaaagtcttctgtccccactgtgggaac
cccacgctgaagaaggtggctgtgacgctgggacaggacgggagcaccaagatgcacttc
tccaagaaccccaaggtcctgaaccccagagggctgaggcactcgctgcctctgcctcag
ggggggaagcacagcaacaacccccagctggtggaggatcagagcttcccccagcagaga
ctgtcccgtaaagctcgccagaagacggacgtcctggacccggactacgcggccggggcg
tcgccgttctgccagaacgacatctacagccgagcggccaacctgcaaatcagagacggc
cggggcggcggcggcaggaggcggagcaaccccaacgccgcccacaagaagtttgtgaag
aagaagtga
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