Cyclopterus lumpus (lumpfish): 117728781
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Entry
117728781 CDS
T09199
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117728781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117728781
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117728781
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117728781
NCBI-ProteinID:
XP_034385521
Ensembl:
ENSCLMG00005000531
LinkDB
All DBs
Position
3:complement(11350848..11357520)
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AA seq
596 aa
AA seq
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MTIHVEGLVAIAIFYLLILFVGIWAAWKNKHSGEAEGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDINIKMSVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFIGLWISVPFALTNPAVSDITITAVKQVYQSPWRGSIHKGDTW
VWIDNFCLLMLGGIPWQVYFQRVLSASSANYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTSYGAISPKERDQADMILPIVLQHLCPPFVSFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLTFRQSASDREIVWVMRITIFVFGGLATLMALVTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAAYLFGMVLRIGGGEPYLQLPPFIYYPGWIIEQRIHHITGEM
EDVVIQKFPFKTMSMLASFLGNVAFSYLAKYLFESGKISHKYDFLDAVVSKHSEEIMDKT
TLVTRSNNIGLSEMAPVKPRLSVTLAAAFTRRDTLPKEMVMEEEESSSDSSHHDEE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccatgtagaggggcttgtggctatcgcgatcttctatctgctgatcctgttc
gtgggcatctgggcggcatggaagaacaaacactccggggaggcggagggcaccgaccgc
agcgaaaccatcatggtcggagggagagacattggactttttgtcggtggatttaccatg
acagcgacctgggttggaggaggatatataaatggcacagctgagtatgtgtatctgcct
gattatggcttggcttgggctcaagctccctttggatatgccctcagccttgttgtgggg
ggtcttttcttcgcaaagcccatgcggtcgcgaggttacgtcaccatgttggacccgttc
caacagaagtatgggaaacgcatgggaggcctcctcttcatacctgcgctcatgggagag
atcttctggtccgcggccatcttatccgccctcggtgctactctgagtgtcatcgtggac
atcaacattaagatgtcagtggttatctcagcgctcattgcaatcttttacaccctggtt
ggaggactctactccgtggcctacacagatgttgtgcagctcttctgtatctttattggc
ctgtggatcagtgtcccgtttgctttgaccaacccggcggtgtcagacatcacgatcacc
gcagtgaagcaggtgtaccagtcgccctggagaggcagcatccacaagggcgacacctgg
gtctggatcgacaacttctgcctcctgatgcttggaggaataccctggcaagtgtatttc
cagagagtcctgtctgcctcctcggccaactacgcccaggtcctctccttcctggccgct
ttcgggtgccttgtcatggcggtgccctccgttctcatcggggccatcggggcctccaca
gactggaaccagaccagctatggtgctatttctcctaaagagagggaccaagcggacatg
attctacccatcgtgctccaacacctttgccccccgttcgtctctttcttcgggctgggt
gccgtgtctgcagccgtcatgtcgtctgcagactcctccatcctgtcagccagctccatg
tttgcaaggaacatctaccagctcacctttagacagtcggcatctgaccgtgagatcgtg
tgggtgatgcgtattaccatctttgtgttcggtggccttgccacgttgatggcgctggtg
actgggacagtttacggcctctggtacctgagctcagacctggtttacgtcatcatcttc
ccccagctgctcagcgtgctcttcgtcaaaggcaccaacacgtacggctccgtggccgcc
tacctgtttggcatggtgctgcgtataggtgggggagaaccctacctgcagctgcctcct
ttcatttattaccctggctggatcattgagcagaggatacaccacatcactggagaaatg
gaggacgtcgtcatccagaagttccccttcaagaccatgtccatgctcgcctccttcctg
ggtaacgtcgctttctcctacctggcaaagtacctgtttgagagcggcaagatttcacac
aaatacgactttcttgacgcggtggtgtccaagcacagcgaagagattatggacaagacg
acgctcgtgactcgtagcaacaacatcgggctgtcggagatggcgcccgtcaaaccgcgg
ctgagcgtgaccttggcggccgccttcacgcgccgcgacacgctgcccaaggaaatggtg
atggaggaggaggagtccagctctgattcctcacaccatgatgaagaatga
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