Cyclopterus lumpus (lumpfish): 117728852
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Entry
117728852 CDS
T09199
Name
(RefSeq) gastrula zinc finger protein xLCGF3.1-like
KO
K09191
general transcription factor IIIA
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117728852
03021 Transcription machinery [BR:
clum03021
]
117728852
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117728852
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
117728852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-met
zf-C2H2_jaz
BolA
zf-C2H2_6
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
GAGA
zf-Vps39_C
Zf-C2H2_ZNF451_2nd
zf-C2H2_15
zf-C2H2_11
zf-H2C2_5
zf-C2H2_ZN142
zf-C2H2_2
zf-C2HE
zf-C2H2_STOP2_C
Zf-C2H2_ZNF451
zf-C2H2_ZNF462
zf-C2H2_FBX41
C2HC_ASCIZ
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
117728852
NCBI-ProteinID:
XP_034385670
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All DBs
Position
3:28928970..28930829
Genome browser
AA seq
292 aa
AA seq
DB search
METEADGADCGGPEPDRKLDPERHPGPDTDETEDSADWEETEEPQSDVNPQNKEVPVSDV
NCSTGNTSISSPECAGSSDHKGHLEKPTSSKTGEKPFQCSLCDKGFGLNKYLKRHMIVHT
EHKPFNCSVCCKTFTHNRYLNDHMFSHTGEKQFSCSVCSKTFTHKRSLNDHRFVHIGEKP
FSCSVCSKTFKKKGNLKAHMTVHTGEKPFQCSLCDKRFGSHSDLKRHMVVHTGEKPFSCS
VCSKTFSRKGYLNGHMFVHTGEKPYSCSVCDKTFSQKHILKRHLIIHTRETN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaagctgatggagcggattgtggaggaccagaaccagacaggaagttagat
ccagaaagacatccaggaccagatactgatgagactgaggacagtgctgattgggaggag
actgaggaacctcagtcagatgtgaaccctcaaaacaaagaagtacctgtaagtgatgtg
aactgtagtactggaaatacatcaatcagctctcctgaatgtgctggaagctctgaccac
aagggacatctggagaaacccactagctccaaaacaggagagaaaccatttcaatgctcc
ctttgtgacaaaggatttggattaaataagtatctaaagagacacatgattgtccacaca
gaacataaaccatttaattgttccgtgtgttgtaaaacatttacacacaatagatacctt
aatgatcacatgtttagccacacaggagagaaacaatttagttgttcagtgtgtagtaaa
acatttacacataagagatcccttaatgatcacaggttcgtccacataggagagaaacca
tttagctgttcagtttgtagtaaaacatttaaaaagaagggaaacctgaaggcccacatg
actgtccacacaggagagaaaccatttcaatgctcactttgtgacaaaagatttggatcc
catagtgatctaaaaagacacatggttgtccacacaggagagaaaccatttagttgttct
gtgtgtagtaaaacattttcacgtaagggatacctgaatggtcacatgtttgtacacaca
ggagagaaaccatatagttgttcagtttgtgataaaacattttcacaaaaacacattctg
aaacgacatttaattatccacactagagaaactaattag
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