Cyclopterus lumpus (lumpfish): 117729141
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Entry
117729141 CDS
T09199
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729141 (tbc1d9)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117729141 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
117729141 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
117729141
NCBI-ProteinID:
XP_034385785
Ensembl:
ENSCLMG00005002677
LinkDB
All DBs
Position
1:complement(18101769..18123474)
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AA seq
1268 aa
AA seq
DB search
MWVSPEDVLLAGALWITERANPYFILQKRKGHGDGGGGLAGLLVGTLDVVLDSSARMAPY
RILYLTPDSLVYWIIAHGTSRKEITEHWEWLEHNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVREDDDTDKFKEASSKFRKLFGMPEEEKLVNYYSCSFWKGKVPRQGWLYLSI
NHLCFYSYLLGKEAKLVVRWADITQLEKSATLLLPDAIKVSTRINEHVFSVFLNINETFK
LAEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADNS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYLERELTGSLNSSDDEV
YSQSGSLLSSSPQYSSSSEGERTFNLNDRSVPTATQALMTMYRRRSPEEFNPKLAKEFLK
EQAWKNHFTEYGQGVCMYRTEKTKELVLKGIPESMRGDLWLLFSGAINEMATHPGYYEDL
VEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNI
VTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPQLYDCMQ
DLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYDGIKVIFQLALSVLHANIHQLLDCK
DDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDNGEPHPDVDIFKLVLSSYENFGSIR
ADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTSCYWG
GSSNPTERHDPSLPYLEQYRIDVEQFKGLFNLLFPWATGAHSDPLALRFFSLLDQNGDAL
INFREFINGLGVLYHGDLIEKLKLLYKMHVIPEITHEPEEPDSAFEATQYFFEDVTPETS
IGHNSKCRSEQDDGFVRVTFKTEKVKKLNTPEYRHYLKLWNQETKNLPKLNQSQFIELCK
TLYSMFSEDVAEQELYHATATVTSLLLEMGEVGKLFSSSGRKDNDTEDQSEPSMCTRDAT
DSKPGRQAVLDGPADCLAPVGLEGKGGGGSERLPPMQDIKLEDSSPKDTGASSAMLISDD
ETKDDTSMSSYSVLSAGSHELDEKLQCEDIADDTVLVRSGSCSGGERRRRRRSSSRPHGR
GLPHSTSIDKDWAITYEQFLASVLTEQALVHYFEKPVEVAARITNAKNISKVGRALLSTS
DYEILLSG
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcagtcccgaagatgttttgctggctggcgcattatggatcaccgagagagca
aatccatatttcatcctccaaaaacgcaagggccacggggatggaggcggggggctagcg
ggcttgttggttggaactctggatgtcgtcttggactccagcgctcggatggccccgtat
cggatcctgtacctgactcccgactctttagtttactggatcattgctcatggaacctcc
cgtaaagagatcacagagcactgggagtggctggaacataacctactgcagactctctcc
atctttgagaatgagaatgacattaccacctttgtcaaaggaaaagtccagggcatcatt
gcggagtataacaagaaccacgacgtcagagaggacgacgacacggacaagttcaaggag
gccagctccaagtttcgtaagctgtttggaatgccggaggaggaaaaactggttaactat
tactcctgcagcttctggaagggcaaggtgccccgacagggatggctctacctcagcatc
aaccatctctgcttctactcctacttactaggaaaagaagccaaattggtggtgcgttgg
gcagatatcacccagctggagaaaagcgccaccctcctgctgcccgacgcaatcaaggtg
agcactcgcatcaacgagcacgtcttctccgtcttcctcaacatcaatgagaccttcaag
ctggcggagcagctggccaacatcgccatgcgtcaactcctggacaacaaaggcttcgag
caggaccgctcgctgcccaagctcaagaagaagtcgcccaagaaggtgtcggcactcaag
agggatttggatgcgagagcaaagagcgagcgttaccgggcgctcttccgtctgcccaaa
gatgaaaaactggacggacacacagactgcaccctgtggaccccctttaacaagatgcac
atcctgggacagatgtttgtgtccaccaactacatctgcttcaccagcaaggaggagacg
ctgtgcagcctcattatcccgctacgagaggtgactatcgtggagaaggcagacaattcc
aatgtgctgcccagcccgctctccatcagtaccaagaatcggatgacatttcttttcgct
aacctgaaggaccgagacttcctggtccagaggatttctgacttcctgcagcagaccacc
tctaagatctacctggagagggagcttactggcagcctaaacagctcagacgacgaggtt
tactcccagtctggatctctgctctccagcagcccccagtacagctcgagctcagaaggc
gagcgtacgttcaacctgaacgaccgcagcgttcccacagccacacaagccctcatgacc
atgtaccgtcgccgctctcctgaggagttcaatcccaagctggcgaaagagttcctgaag
gagcaggcatggaagaaccactttacagagtacggacagggtgtgtgtatgtaccgcacg
gagaagacgaaggagctggtcctcaaggggattcctgagagcatgcgaggagatctctgg
ctgctcttctctggggcgatcaacgagatggccacccaccccgggtactacgaagacctg
gtggaaaagtcgatgggcaaatacaacctggcaaccgaggagattgagcgagacctgcac
cgctctctgcccgagcacccagccttccagaacgagatgggcatcgctgccctgcgcagg
gtcctcacagcctacgcattcagaaaccccaacatcggatactgtcaggctatgaatatt
gtgacatctgtgttgctgctctacgctaaagaagaggaggctttttggctgctcgtggcg
ctctgtgagaggatgctgcctgactactacaacactagggttgtcggggccctagtcgat
cagggggtgttcgaggagctcgcccgtgagtacgttccccagctgtacgactgcatgcag
gacctcggggtcatctccaccatctccctctcctggttcctcaccctcttcctgtccgtc
atgccgttcgagagcgcagttgtggtggtggactgcttcttctacgacggcatcaaggtc
atctttcagctggcgctctccgtgctgcacgccaacatccaccagctgctggactgcaag
gatgacggagaggccatgacggtgctgggcagatacttggacagtgtcacgaataaggac
agcaccctccctcccatcccccacctgcactcattactgacagacaatggagaaccgcat
ccagacgttgacatctttaaactagtcctcagctcctacgagaatttcggttcaatccgt
gcagatgtaattgaacagatgcgtttcaaacagagactgagggtcatccaaaccattgaa
gatacaaccaaacgcaacgtggtaaggactattgtaacagagactgccttcagcattgac
gagctggaggagctctatgtgctcttcaaggcggagcacctgaccagctgttattggggc
ggcagcagcaaccccactgagcgccacgaccccagcctgccatacctggagcagtaccgc
atcgacgtggagcagttcaaaggcctgttcaacctgctgttcccctgggccaccggggcc
cactcggaccccctggctttgcgcttcttcagtctccttgaccaaaacggagatgccctc
atcaattttcgagagttcatcaatggcctgggtgtcctgtatcacggggacctcattgag
aagctgaagctgctctacaagatgcatgtcatacctgaaatcactcatgaaccggaagag
ccggactcggctttcgaggccacacagtacttctttgaagacgtcactccagaaacatcc
atcggtcacaactcaaagtgcagaagtgagcaggatgatggctttgtcagagtcacattt
aagactgaaaaagtgaagaaactgaatactcctgaatatcgccattacttgaaactgtgg
aaccaggagacaaaaaacctccccaagctgaatcagagccagttcatcgagctttgtaag
accctctacagcatgttcagtgaggatgttgcagaacaggagctctatcacgccacggcg
acggtcaccagtctgctgctggaaatgggagaagtgggaaagctcttctcctcctctggg
cggaaggataacgacacggaggatcagtcagagccgagcatgtgtacgcgagacgccact
gactccaaacccggccggcaggccgtgctcgatggtcccgctgactgcttggcccccgta
ggtctggaggggaaggggggcggagggagcgagcggctgccacctatgcaagacatcaag
ctggaggactcctctcccaaagacacgggcgcgtcatccgccatgctcatctcggacgat
gaaaccaaagatgacacttcgatgtcctcttactccgtgctcagcgcaggctctcatgag
ctggatgagaagctgcagtgcgaggacatcgcggacgacacggtgctggtgcgcagcggc
agctgctctggtggtgaaagaagaagaagaagaagaagcagcagccggcctcacggccga
gggctgcctcacagcacgagcatcgataaagactgggccatcacgtatgagcagttcctg
gcctccgtgctcaccgagcaggccctggtgcattatttcgagaagccagtggaggtggcg
gctcgaataacgaacgccaagaatatcagtaaagtcgggcgcgcccttctgtcgacgagt
gactatgagatcttgctatctggctga
DBGET
integrated database retrieval system
