Cyclopterus lumpus (lumpfish): 117729166
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Entry
117729166 CDS
T09199
Name
(RefSeq) adenine DNA glycosylase-like isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117729166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117729166
Enzymes [BR:
clum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
117729166
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117729166
Prokaryotic type
117729166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELO
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-GeneID:
117729166
NCBI-ProteinID:
XP_034385850
Ensembl:
ENSCLMG00005014746
LinkDB
All DBs
Position
4:complement(21368519..21378679)
Genome browser
AA seq
744 aa
AA seq
DB search
MSRLRSAMLKGKRAGLEMAEAAKPARKRAKKAVKEEGTGDSPSPASTYHSFHDPADVVLL
RSRLLHWYHREKRELPWRTLAVTESDLNIRTYAVWVSEIMLQQTQVATVIDYYNKWMKRW
PTVQDLAAATLEEVNQMWAGLGYYSRGKRLHEGAQKVVSELKGQMPHTVDSLLKQLPGVG
RYTAAAVGSIALGQVTGAVDGNVIRVLCRLRAIGADSTSPAVTEALWSQANILVDPEGPG
DFNQAMMELGARVCTPKGPLCSQCPVQSHCHSFRKVHVKQEKTSRKLLGKLNRKLSTLPD
IEDCANSETCPLCPSQPWDDELGVQNFPRKPAKKPPRVERTLTCVVIRPGVEGEDEYLLT
QRPNKGLLAGLWEFPSLLQEKKSSEMKEKRALCTQISGLLGTHLTESLFQYVGEVVHIFS
HIHQTYVVQSVRLKAADAQTQAENAQWLTGSALQEAAVSTGVKKIVKLCDSVDSQKEQTS
KMASAWQSVLSVHQRIVDNGDKRADQWPLVYSPVSVSLIFLVYLCVVWAGPRLMKHREPF
DLKIFLIVYNFAMVGLSAYMFYEFVVTSWLSSYSFLCQPVDYSNSPLAVRMAKACWWFFF
SKVIELTDTVFFILRKKNSQVTFLHIYHHGTMIFNWWVGIKYVAGGQSFFIGMVNTCVHI
VMYSYYGLAALGPHMQKYLWWKRYLTSLQLVQFLLFLLHSGYNLFTDCDFPDSMNAVVFG
YCVTLVILFSNFYYQSYLNKKKQK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggttgcgttcggcgatgcttaaaggaaagagagccggactggagatggcggag
gcggccaaacctgcgcggaagagggcaaagaaagccgtgaaagaagaaggaaccggggac
tccccgtctccagcgtccacgtaccacagcttccatgaccccgctgacgtggtgctgctg
cgctctcggctcctccactggtaccacagggagaagagggagctgccatggaggactctg
gcggtgacagagtccgacctcaacatcaggacatatgccgtctgggtttcagaaatcatg
ctgcaacagacccaagttgccacagtaatagactattacaacaaatggatgaagcggtgg
cccacggtgcaggatctcgctgctgctacgctagaggaagtgaaccagatgtgggcgggt
ctgggctactactccagagggaaaagactgcatgaaggggctcaaaaggtggtgtcggag
cttaaggggcagatgcctcacacagtggacagcctgctgaaacagctgcccggggtggga
cgctacacagctgcagctgtgggctctattgctctcggtcaggttactggagcggtggat
ggcaatgtgattcgggtgctgtgtcgcctgagggccatcggcgctgacagcacgagtcct
gcagtgacggaggctctttggagtcaagccaatatacttgtggaccctgagggacccggg
gactttaaccaagccatgatggagctgggagctcgagtctgtacccctaaaggacctctg
tgcagccagtgtcccgtacagtctcactgccactcttttcgcaaggttcatgttaaacaa
gagaaaacctccaggaagctcttggggaagctgaacaggaagctgtccaccctgcccgac
atagaagactgtgcgaacagcgagacgtgtccgctgtgtccctcgcagccctgggacgac
gagttgggcgttcagaacttccccagaaagccggcgaagaagccgcctcgcgtggagcga
actctgacctgcgtggtgatcagacctggagtggagggagaggacgagtacctgctcaca
cagaggccaaacaaagggttgctggccggcttgtgggagtttccgagtcttctgcaggag
aagaagagctccgagatgaaagagaagagggctctgtgtacgcagatcagcgggttactg
ggaacccatctgacagaaagcctcttccagtatgtgggggaggtggttcacatcttctcc
cacatccaccagacgtacgtggttcagagtgtgcgtttgaaggccgccgacgcacaaacg
caggctgaaaatgcgcagtggctcaccgggtcggctcttcaggaagccgctgtgtccacg
ggagtgaaaaagatcgtgaagctttgtgactcggttgacagtcaaaaagagcaaacctcc
aagatggcttctgcgtggcaaagcgtcctatctgtgcaccagaggatagtggacaatgga
gacaaaagggcggaccagtggccactggtctactcccccgtgtcggtctcgctcatcttc
ctggtgtacctctgtgtggtctgggccggccctcgtctgatgaaacacagggaacccttt
gacctcaaaatcttcctcattgtttacaacttcgccatggtcggcctgtcggcctacatg
ttctatgagttcgtggtcacatcctggctctcgagctacagcttcctctgtcagcctgta
gactacagcaacagccccctggcagtgaggatggccaaagcctgctggtggttcttcttc
tccaaggtcatagagctcacggacacggtgttcttcatcctgaggaagaagaacagccag
gtgactttccttcacatttaccaccacggcaccatgatcttcaactggtgggtgggcatc
aagtatgttgccggcgggcagtcgtttttcatcggcatggtgaacacctgtgttcacatc
gtgatgtattcttactacggcctggccgcgctcggccctcacatgcagaagtacctgtgg
tggaagagatacctcacctctctgcagctggtgcagttcctgctgttcctcctgcactcc
ggctacaacctgttcacagactgcgacttccccgactccatgaacgcggtggtgtttggt
tactgcgtcacgctcgtcatcctcttcagtaacttctattatcagagctacctcaacaag
aagaagcagaaataa
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