Cyclopterus lumpus (lumpfish): 117729192
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Entry
117729192 CDS
T09199
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117729192 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
EGF_Teneurin
Ank_3
Ank_5
Ank_4
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
117729192
NCBI-ProteinID:
XP_034385927
Ensembl:
ENSCLMG00005016691
LinkDB
All DBs
Position
4:21731442..21769871
Genome browser
AA seq
2495 aa
AA seq
DB search
MEQIPGFSSGKSIVFVFCFIRLSLALQCMDDKAPCVNNATCLTFSNGTEYCRCAPGFLGE
YCHQKDPCHPGFCLNGGNCSVSMLAGVPVPGSAACTCSLGYTGQQCQSPQNSTCYPNNPC
ANKGVCTLLSLDKYKCECARGWTGPQCEHEDSCLSSPCANAGMCSSPSGGSYTCSCPAGY
TGPRCLNDTNECAVTPSICQNEGHCVNTPGSYKCTCDPGFTGRHCESSYIPCSPSPCLNG
GTCHQNSETSYSCHCLPGFNGTNCENNIDDCPGHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLFGSYVCVCVNGWSGPDCSENIDDCATAACTAGSTC
IDRVASFVCLCPYGKTGLLCHRDDACISNPCRDGSQCDTNPINGMFNCNCAPGYVGSTCN
TDRDECSIGTNPCEHGGQCVNTEGSFTCNCVRGYAGPRCEQDVNECASNPCQNEGTCLDR
IGDYTCICMPGFEGTHCEIEINECTSSPCLNQGKCLDQVSRFICECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFNGLLCEDNINDCVPEPCHHGVCKDGIATFSCE
CQPGYTGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCPPGTTGVNCEINEDDCASNPC
EYGECHDGINEYKCVCALGYTGLKCDVEINECNSNPCMSGGTCMDKVNGFLCLCPPSTHG
PLCLSGTDHCAPQPCVHGECIEQQHGYRCECEAGWVGQQCEQEKDECQPSPCQHGGTCVD
RHNGHTCLCQPGFRGVNCEKNIDECASGPCLNQGICIDGVNSYSCQCSPPFTGKHCEVEQ
VPCASHPCERGVCRPSSDYTSYTCRCPAGWQGTRCSEDVDECRKNPCKNTGRCMNSPGSY
TCKCQPGYSGHNCQTDIDDCSPNPCLNGGSCVDDVGSFSCDCRPGFEGERCETEVDECAS
QPCRNGAVCRDYVNSFVCECRPGFDGILCERNILECTESSCLNNGTCIDDINAFSCRCRP
GFYGTFCEYEQNECDSQPCKNGGTCTDGLGAYRCTCPVGYNGQNCQNFVNLCSQVRCHNG
GSCSQTSTSWTCHCQMGWTGLYCDVPNMSCQDFAARKGLEVENVCKNAGRCVNVGKSHRC
QCQPGYTGSYCEEMVDECQSNPCRNGATCKDYQGTYECICKPGYQGVNCEYDVDECHSRP
CLHGGTCINLINRFTCACPPGAHGLQCELNEDDCAPKLGSFEPRCLNGGQCVDGVGRYSC
SCPPGFVGEHCEGDLNECLSGPCHATGSLDCVQLVNDYQCRCRLGYTGRHCESMVDLCLS
KPCHKGGACSMNMSSVHGYTCSCAPGFTGFNCGEIEGYSCAKLRCQNGGRCVESPGHLYC
QCQSGFSGPHCENEQRCPWNCQNGGTCIKDPSNPYQYSCHCTAHFSGPYCENKLVISRTL
ECPYPQCEQHSRDNVCDNQCNNHECHWDGGDCSLNWKQPWVNCTASVPCWDLFKNGRCDK
ECDNLGCLFDSFDCQEAPSSCKYDRYCADHFGNGICDQSCHTEACGWDGLDCSTDTPAKV
IDGMLVIVVRLQPKELLGDLRGFLRSLGAVLHTNLQVKLDKNKKPMVYPYYGEEQVLQIQ
RSRSRRELEREVIGSVVHLELDNRECSQSSVDCFSNTKEAASFLAAAHIKDELPYPLVSV
DSKPRIDAPVPTPLMYLVGVAVVIILLILVLGMLAAKRKHKHGALWLPDGFLANKNDKRR
EPVGQDDFDMKNFKTPDEAMMDGVQSQRWLDDEVPPKKSRTEDKPLLPIAMDGGVDRREW
TLQHRKAADISLTPPQADLDADCLDVNVKGPDGFTPLMLASLRNGGGPDCSLHGGEEEEE
SGGDEPGPSVISDLIAQGASLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDN
MGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLVLAARLAVEGMVEELIHCHA
DINAVDDHGKSALHWSAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQV
LLDHYSNRDITDHLDRLPRDSAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNMCGPN
GVGFIGMRPGPQGKKSRRGGGGAKVGGVGGGAKELKDMKAKRRKKPAGGEGPGVVAGGGS
GVTAGGNANGVKAAAGLPESSVTMSPVDSLESPHSYTGDVSGAVSTTANSPPLLSSQTSR
PMLPPVSHMLGQQQGWVGMTKHGYGGHMFGLVSHQMGGSHPGMGQHHSQGPMLTPMNVTM
SREQLPPIVTFQMMAPGGSQAMLKQPQPGQVQVTQSQGQSQNQGHSQQGPGRLRCSQGMM
YQMPEQMSMGHGLSHALQHPHTVSHGGIEGQSRPLPSYPPMQSPVDKYPTPPSQHSYTTT
GSEGTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHHALPS
SRHTHIPEQAQLQPQSQQMQQASQQPQLGNMQVFA
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatccccggtttctcctcgggaaaatcaatagtcttcgtcttctgcttcatt
cgcctctctctggctctgcaatgtatggacgataaggcgccttgtgtgaacaatgctaca
tgtctgaccttcagcaatggcaccgagtactgcaggtgtgcaccgggctttctgggtgag
tactgccaccagaaggacccgtgtcaccccggcttctgcctcaacggagggaactgctct
gtgtccatgttggccggcgtacctgtgccgggcagtgccgcctgcacctgctctcttggc
tacaccggacagcagtgccaaagcccccagaactccacgtgttaccccaacaacccctgt
gccaacaagggcgtctgcaccctgctgtccctcgacaaatacaagtgcgagtgtgccaga
ggatggacaggaccgcagtgtgagcacgaggacagctgtctttctagtccctgtgccaac
gctggaatgtgcagctctccgtctggtggcagctacacgtgctcctgtcctgccggctac
acaggtcctcgctgcctcaatgacacaaacgaatgcgccgtcacaccctcgatatgccag
aatgaaggtcattgcgtcaacactcctggctcctacaagtgtacctgtgacccagggttt
acgggcagacactgtgagagctcatacatcccttgctcaccctcaccatgcctcaatggg
ggcacctgccaccagaactctgaaaccagctactcttgccactgccttccaggtttcaac
gggactaactgtgagaacaacattgatgactgccctggtcatcagtgtgccaatggagga
acctgcatggacggagtcaacacctacaactgccagtgcccgccagagtggaccggtcag
cactgcactgaagacgtggacgagtgtcgtctgcagccaaacacttgccagaatggagga
acctgcagcaacctgtttggcagctacgtctgcgtgtgcgtgaatggctggagtggaccc
gactgctctgaaaacatcgatgactgcgctacagcagcgtgcaccgcgggctccacgtgc
atcgaccgcgttgcctctttcgtctgtctctgcccctacggaaagacgggcttgctctgc
cacagagatgacgcctgtatcagtaacccctgcagggatggctctcagtgtgacaccaac
cccatcaatggcatgttcaactgtaactgtgcacctggatatgtgggcagcacctgcaac
accgacagagacgaatgcagcattggtaccaacccgtgcgagcacgggggtcaatgtgtg
aacaccgagggctccttcacatgtaactgtgtgaggggttacgccgggccgcgctgtgaa
caagacgtcaacgagtgtgcttccaacccctgtcagaacgagggcacgtgtctggatcgc
atcggggactacacctgcatctgcatgcccggatttgaggggactcattgtgagattgag
ataaacgagtgcaccagctcgccctgtctgaaccagggtaaatgtctggaccaggtcagc
cgcttcatctgcgaatgcccagcaggcttcagcggagaaatgtgccagatagacatcgat
gagtgctccagcacaccctgtttaaatggggccaagtgcatcgaccggcccaacggatat
gattgtgaatgtgctgaaggcttcaacggtctactttgtgaggacaacatcaacgactgc
gtaccagagccgtgccaccacggcgtgtgtaaagacggcatcgccaccttctcctgtgag
tgccaaccggggtacacgggttccatctgcaatatccaggtccaggagtgccacagcaac
ccatgccagaaccgaggacgctgcattgacctggtcaacgcctaccagtgtaactgccca
ccaggaaccacaggggtgaactgtgagatcaatgaagatgactgtgcgagcaacccctgt
gagtacggagagtgccacgatggcattaacgagtacaaatgtgtgtgcgccctgggatac
acaggacttaaatgtgatgtggagatcaacgagtgtaactcaaacccatgtatgagtggg
ggaacctgcatggacaaggtcaacgggttcctctgcctgtgcccgccgagcacccacggc
cccctgtgcctctctggcaccgaccactgtgctcctcagccttgtgtgcatggagaatgt
attgaacagcaacacgggtatcgttgtgagtgtgaagctggctgggtgggacaacagtgt
gagcaggaaaaggatgagtgccagcccagtccgtgccaacatggtggcacctgtgtggac
cgacataatggccacacctgtctgtgtcaacctggattcagaggtgtgaactgtgagaag
aacatagatgaatgtgcatctgggccctgtctgaaccaaggcatttgtatagatggagtc
aacagttattcctgccaatgtagtcctccattcacaggtaaacactgcgaggtggaacag
gttccctgtgcctctcatccgtgtgagaggggagtgtgtcgtccgtcttcggactacacc
tcctacacctgtcgatgtcccgctggttggcaaggtacacgctgcagtgaggatgttgac
gaatgcagaaagaacccttgcaaaaacactggtcgttgcatgaacagcccgggcagctac
acgtgtaaatgtcaacccggatacagcggacacaactgtcagacagacattgacgactgc
tcaccaaacccgtgcctgaatggaggctcttgtgtggacgatgtcgggagcttctcctgt
gactgccgcccgggtttcgaaggcgagcgttgtgagactgaggtggacgagtgcgccagc
cagccgtgcaggaacggtgccgtctgccgggactacgtcaacagctttgtgtgcgagtgc
cgaccaggctttgatggaatcttgtgtgaacgcaacatcctcgaatgtaccgagagctcc
tgtctgaacaacgggacctgcattgacgacatcaacgccttctcttgccgttgccgtcct
ggtttttacgggacgttctgcgagtacgagcagaacgagtgcgactctcagccctgtaag
aacggaggcacctgcaccgatggtctgggcgcctaccgctgcacctgccctgtgggatac
aatgggcagaactgccagaacttcgtgaacctgtgcagccaggtgcgctgtcacaacggc
ggctcctgctctcagacatcgacctcctggacctgccactgtcaaatgggatggacggga
ctgtactgtgacgtcccgaacatgtcctgccaggactttgccgccaggaagggtctggag
gtggaaaacgtgtgcaagaacgctgggcggtgcgtgaatgtgggcaaatcccaccggtgt
cagtgccagccaggatacacgggcagctactgtgaagagatggtggacgagtgccagtca
aacccttgtcgcaacggagctacatgcaaggactaccagggcacatacgagtgcatatgt
aaaccgggctaccagggggtgaactgtgagtatgatgttgacgaatgccactctaggccc
tgcctccatggtggaacctgcatcaacctcatcaaccgtttcacgtgcgcctgcccacct
ggagcgcatgggctccagtgtgaattgaacgaggatgactgcgcccccaagctcggctcc
tttgaacctcgctgtctgaatggaggacagtgtgtggacggcgtgggccgttactcgtgc
tcctgcccaccgggattcgtcggggaacactgcgaaggggatctaaatgaatgcctgtct
gggccgtgccacgccaccggcagcctcgactgcgtgcagctggtcaacgactaccagtgc
cgctgtcgccttggatacacgggtcgtcactgtgagtccatggtggatctgtgtctgtct
aaaccgtgccacaaaggtggcgcctgctccatgaacatgagctcagtacatggctacacc
tgctcctgtgctcctggcttcactgggttcaactgtggcgaaatagagggctacagttgt
gcgaagctacgttgccagaatggcggtcgctgtgtggagtcaccgggccacctgtactgc
cagtgccagtcgggcttcagcggaccacactgtgagaacgaacagagatgtccatggaac
tgccagaacggaggaacctgcatcaaagacccatccaacccgtaccagtacagctgccac
tgtaccgcgcacttctcgggaccgtactgcgagaacaaactagtcatatcacgcactcta
gagtgcccctatccgcagtgtgagcagcattcgagggataacgtgtgtgacaatcagtgt
aacaaccacgaatgtcattgggacggaggcgactgctccctcaactggaagcagccctgg
gtcaactgcaccgccagtgttccctgctgggatctctttaagaatggacgttgcgataag
gagtgcgacaacctcgggtgcctctttgacagctttgattgccaggaggccccctcatcc
tgcaagtacgacaggtactgcgcggaccactttgggaacggcatctgtgaccagagctgc
cacacggaggcttgtggctgggacggcctggactgctccactgacactccagccaaagtg
atagatggcatgctggtcatcgtggtccggctgcagcctaaggagctgctgggagatctg
aggggtttcttgcgctccctgggagccgtgctgcacaccaacctgcaagtgaagctcgat
aagaataagaagccaatggtttacccgtactatggggaggagcaggtactacaaatacag
aggagcagaagcaggcgggagctggagagggaggttattggatctgtggtgcacctggaa
ctcgataaccgcgaatgttcccagagctcggtcgactgtttctccaacacgaaggaggct
gcgtcattccttgcagcagcacacatcaaggatgaactgccttaccctctggtgtctgtt
gacagtaagccgagaattgacgcgccagttccaacgcctctgatgtacctggtgggagtg
gctgtggttattattctcctgatccttgtgctggggatgctagcagccaagaggaagcac
aaacatggcgccctgtggctgcccgatggcttcttggccaataagaacgacaaaaggaga
gagcctgtcggacaggatgactttgacatgaagaatttcaagaccccggatgaagccatg
atggatggagttcagagtcagaggtggctggacgacgaggtcccacccaagaaatcaaga
actgaagacaaacccttgctgcccattgctatggatggaggtgttgaccgaagggagtgg
accctgcagcatcgcaaggctgctgacatctcgctcactcccccacaggccgacctggat
gctgactgtctggatgtgaacgtcaagggacctgatggcttcaccccactgatgttggca
tcgctgcgtaatggtggaggcccggactgcagcctgcatggaggagaggaagaggaggag
agcggaggagatgaaccggggccgagtgtcatttcagacctgatcgctcagggtgcttct
ttgatggctcagaccgaccgcacgggagaaacggcgctccatctggctgcccgctacgcc
agggccgacgctgccaagagactgctggatgctggcgctgatcccaacgcccatgacaac
atgggcagaactcctctgcatgctgccgtggcggctgatgcccagggagtcttccagata
ctgatccgtaatcgtgcaacagaactggacgcccggatgaatgacggcactactccactg
gtcctggcagcccggctagctgtggagggcatggtggaagagctgatccactgccatgct
gacatcaatgctgtagacgaccacggcaaatctgctcttcactggtcagctgcagttaat
aatgtggaggcgacactcgtgcttttgaagaacggagccaaccgtgacatgcaggacaat
aaggaggagactcctctgtttcttgcagccagagaaggcagctttgaagcggctcaggtt
ctcctcgaccactactccaaccgcgacatcaccgatcacctggatcggctgccccgcgac
agcgctcaagaacgcatgcatcacgacatcgtgcgcctgctggaccagtacaatttggtt
cacagtccacacaatggcccgaaccacatgggtggaggagggaacatgtgcgggcccaac
ggagtgggcttcatcggcatgcggcccgggccgcaggggaagaagagcaggaggggtgga
ggtggggcgaaggtgggaggcgttggaggcggagctaaggagctaaaagacatgaaggca
aagagaagaaagaagccggctggaggagaggggccgggtgtggttgctgggggaggaagt
ggagttacagcaggagggaacgcgaatggcgtcaaggcagcagcaggacttccagagagc
tctgtcaccatgtcgcctgttgactccctggaatcgccgcactcgtacacaggcgacgtg
tccggcgccgtctccaccacagcaaactcccctcccctcctgagcagccagacctccagg
ccgatgctgccgcccgtcagccacatgctgggacagcagcagggctgggtgggcatgacc
aagcacggctacggcggccacatgttcggcctcgtgtcgcaccagatgggggggtctcac
ccgggcatgggccaacaccacagccagggcccgatgctgactcccatgaacgtcaccatg
agccgggagcagctgccgcccattgtcacgttccagatgatggcccccggagggagccag
gccatgctgaagcagcctcagccggggcaggtacaggtcacccagtcccaggggcagagc
caaaatcagggtcactcccagcaggggccaggccgcctccgatgctcccagggtatgatg
taccagatgcctgagcagatgagcatggggcacgggctctcccacgccctgcagcacccc
cacaccgtcagccacggggggattgagggacagtctcggccgctaccctcctatccaccc
atgcagagccctgtggataagtaccccaccccaccctcccagcacagttacaccaccact
ggctcagagggcaccaccccgggccactctgcccacccacccagcgagcacccgtatctc
accccctcgcccgagtccccggacccttggtcgtcctcttcgccgcactccaactcggac
tggtctgacgtcaccaccagccccacccctctggggaacccccaccacgcactgccgtct
tcacgccacacacacattccagagcaggctcagctgcagccgcagtcgcagcagatgcag
caggcctctcaacagcctcagctcggcaacatgcaggtgtttgcgtag
DBGET
integrated database retrieval system
