Cyclopterus lumpus (lumpfish): 117729243
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Entry
117729243 CDS
T09199
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117729243 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117729243 (cnga1a)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117729243 (cnga1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF6033
Connexin
GEN1_C
Motif
Other DBs
NCBI-GeneID:
117729243
NCBI-ProteinID:
XP_034386065
Ensembl:
ENSCLMG00005005432
LinkDB
All DBs
Position
1:complement(16198732..16202532)
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AA seq
669 aa
AA seq
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MTTSTPLHSLTEPPHMVSHLSTDSEDELASESHPHRLLNMNNNNTEEKKEMENKETEEKE
AKEKEEREKEKEKEKEKEKEKEKEKEKDKDKPKELFVINPAGNLYYNWLFIITLPVMYNW
TMIIARACFEELQHNYIIYWVLLDYTSDIIYLADMFFRTRTGYLEQGLMVKDKKLLRDRY
INSFQFRLDFISMLPTDFLYFFLGLDYPEIRINKLLRISRLMEFFTRTETKTNYPNIFRI
GNLIMYILIIIHWNACFYFSFSKYIGFGADDWVYPALDDPDQPAFGEFGRKYSFSLYWST
LTLTTIGETPPPALDSEFIFHVVDFLVGVLIFATIVGNIATMISNMNAAQAQFQSRIDNI
KQYMQVRKVDKVLELRVIKWFDYLWNNGKAQDEREVLRYLPDKLKAEIAIQVHMDTLKKV
RIFADCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKDGKLAVVADDGVTQFVV
LGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLYKDDLMESLLEYPDAKGMLED
KGREILMRDNLIDLDPANIMPEAKELEENVNKLYNTMELMQFKLKKILGKYKNTDKALRH
RIADLEHLTGEEVEDEDEEEEEMKREEKEVEAERKDKEKEEKGEEIKEGKEEGEEEEEKK
EEAKEEEEK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttccaccccgcttcattccctcaccgagcccccccacatggtgtcacacctc
tccacagacagcgaggatgagcttgcgtctgaatcacatcctcatcgcctgctcaacatg
aataacaataacactgaagaaaagaaggagatggagaacaaggaaacggaagaaaaggag
gcaaaggaaaaagaagagagggaaaaggagaaggagaaggagaaggagaaggaaaaggaa
aaagagaaagaaaaggaaaaggacaaagacaagcccaaagagttattcgtcatcaatcct
gctgggaatttgtattacaactggttgttcatcatcacactaccagtcatgtacaactgg
accatgatcatagccagggcttgctttgaggagctgcagcataactacataatctactgg
gttcttctggactacacctcagacatcatctatctggctgatatgttcttcaggaccaga
acaggttaccttgagcaaggcctgatggtgaaagataagaaactgctacgtgatcgctac
atcaacagcttccagtttcgtcttgattttatctccatgctgcccactgacttcctctat
ttcttcctcggcctcgactacccagagatccgcatcaacaaactgctgagaatcagccgc
ttgatggagttcttcacgaggacagaaactaaaaccaactaccccaacatcttccgcatc
ggaaacttgatcatgtacatcctcattatcatccactggaatgcttgcttctacttctct
ttctccaaatacattggttttggtgctgatgactgggtttacccggctctggatgatcct
gatcagcctgcgtttggggagtttggtaggaagtattcgttcagcctctactggtccaca
ctgaccctgactaccatcggggaaacgccaccaccagcactggactctgaatttatcttc
catgtggttgactttttagtgggggtcttgatctttgccaccattgtaggaaacattgca
accatgatctccaatatgaacgctgcccaagctcagtttcagtcccgaatcgacaacatc
aagcagtacatgcaggtccgaaaggttgacaaggttctcgagttgcgagttattaagtgg
tttgattatctgtggaataacggcaaagcacaggacgaaagagaggtcctgcggtatctt
ccggacaagctcaaggctgagatcgccatccaagtccacatggacacgctcaagaaagtt
cgtatttttgcagactgtgaggctggcctactgatcgagctggtactcaagctgcagcca
caggtgttcagtcctggagactacatctgcaaaaagggcgatatcggccgtgagatgtac
atcatcaaggatggaaaacttgcagtcgttgctgatgacggcgtcacacagtttgtcgtg
ttgggaagtggcagctattttggtgagattagtattctcaatattaaaggcagcaaagca
ggcaaccggcgaacggcaaacatccgcagcatcggatactctgacctcttctgcctgtac
aaggatgacctgatggagtcactgctagagtacccggatgccaaaggcatgctggaggac
aaaggccgggagatcctgatgagagataatctgatagatttggacccagctaacatcatg
cctgaggccaaggagctggaggagaacgtcaacaaattgtacaacacgatggagctgatg
caattcaagcttaagaagatcctgggaaaatacaagaacactgacaaggctctgagacat
cgcatcgcagatctggagcacctcacaggagaggaggtggaagacgaggatgaagaggaa
gaagagatgaaaagggaagagaaagaggtggaagcagaaaggaaggataaagaaaaagag
gaaaagggcgaggagataaaagaaggcaaagaagaaggtgaagaggaagaggaaaagaag
gaagaggcaaaagaggaggaggaaaaataa
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