Cyclopterus lumpus (lumpfish): 117729275
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Entry
117729275 CDS
T09199
Symbol
colgalt2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00310
Lysine degradation
clum00514
Other types of O-glycan biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117729275 (colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117729275 (colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117729275 (colgalt2)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117729275 (colgalt2)
Glycosyltransferases [BR:
clum01003
]
O-Glycan biosynthesis
O-linked Gal type
117729275 (colgalt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117729275
NCBI-ProteinID:
XP_034386094
Ensembl:
ENSCLMG00005015917
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All DBs
Position
4:complement(21635807..21665153)
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AA seq
615 aa
AA seq
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MRALGAVTVGVLWALLAAAVPDDVSELATLVQEQFKPESSLLKPKVMIAIVARNAAHSLP
HYLGCIERLEYPKERIAIWAATDHNVDNTTAMLREWLKRAQSVYHYVEWRPMEEPKSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPRVLNLLMAENLTLA
APMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCYAVPMVHSTFLMDLRRESSR
DLSFYPPHPDYSWAFDDIMVFAFSARQAGVPMYVCNREHYGLLPVPLKAQQSVEEERESF
IHTITEALIDHDIEPSEHLYSPPSLQGTMGFDEVYLINLKRRLDRRTRMLKTMSSLGIHT
TLMDAVDGKALNTSQLQALGIEMLPGYKDPYSGRVLTRGEIGCFLSHHSVWKQVLERGLQ
RVLLLEDDVRFEPRFKRRLQAIIDDIDKTQLDWDLIYVGRKRMQVQQPEQSVDGVNNLVK
ADYSYWTLGYALSQQGARKLLAADPFTRMLPVDEFLPVMFDKHPNTQFMSHFEPRDLKAF
SVEPLLIYPTHYTGEPGYISDTETSTIWDDEAVSTDWDRQDARKTAQQDSIRPVAQNSVS
GESPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgctcggggccgtgacagtcggtgtgctgtgggcgctgctggccgctgcggtg
cccgacgacgtgtcggagctggcgacgctggtgcaggagcagttcaagcccgagtcctcc
ctgctgaagccaaaggttatgatcgccattgtggctcgcaacgcagcgcacagcctgcca
cactacctgggctgcatcgagaggctggagtacccgaaggagcgcatcgcgatctgggcg
gcgacagaccataatgtggacaacaccactgctatgttgagagaatggctgaagagagcc
cagagcgtctaccactacgtggagtggagacccatggaggagcccaagtcctacacagat
gagtgggggccgaagcactggcctccttcgaggttcaaccatgtgatgaagctgagacag
gcggcgctgaaggccgccagggaacgatgggccgactacatactttttgtcgacagcgac
aacctgctgaccaacccccgcgtgctgaacctgctgatggctgaaaacttgaccctggct
gctcccatgttagagtctcgctcgctctactccaacttctggtgcggcatcaccccgcag
ggttactacaagcgaaccccggactaccagcccatacgggagtggaagcggctcggctgc
tacgccgttcccatggtgcacagcaccttcttaatggacctgcgtcgggaatccagccgg
gacctgtccttctacccccctcacccggactacagctgggccttcgacgacatcatggtg
tttgctttctcggctcgtcaagcaggtgtgccgatgtacgtgtgtaacagagaacattac
ggtctcctgcccgtccctctcaaagcgcagcagagcgtggaagaagaaagagagagtttc
atacacaccatcacagaggctttaattgaccacgacatcgagccctccgagcacctgtac
tctccgccctccctgcagggcaccatgggcttcgatgaggtttacctgatcaacctgaag
cgtcggctggacagaagaaccaggatgttgaaaacgatgtcttcgctgggtatacacacc
acgctgatggacgcagtggacggaaaggctctcaatacgtcccagctgcaggctctagga
atagagatgctgccgggctacaaggacccgtactccggccgggtgctgaccagaggggag
atcggttgcttcctcagccaccactccgtatggaaacaggtgttggagcgcggcctccag
agggttcttcttttagaggacgacgtgcggtttgaacccaggtttaaacgacggctccag
gccataatcgatgacatagacaaaacccagctggactgggacctcatctacgtggggcgt
aaacgcatgcaggtgcagcagccggagcagtcggtggacggcgtgaacaacctggtcaag
gccgactactcctactggacgctcggctacgcgctgtcgcagcaaggagcccggaagctg
ctggccgccgaccccttcacgaggatgctgcccgtcgacgagttcctgcccgtcatgttc
gacaaacacccaaacactcagttcatgtctcactttgagccgcgggacctgaaggccttc
tccgtggagccgctgctcatctatcccacccactacaccggagagccgggctacatcagc
gacacggagacctccaccatctgggacgacgaggccgtgtccacagactgggaccggcag
gacgcccgcaagacggcgcagcaggacagcatccggcccgtggcgcagaacagcgtctcc
ggagaatcgccgccgcctgcagctcgagcctcgcgggacgaactctga
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