Cyclopterus lumpus (lumpfish): 117729277
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Entry
117729277 CDS
T09199
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117729277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117729277
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117729277
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117729277
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117729277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
PH_21
PH_11
PH_8
Motif
Other DBs
NCBI-GeneID:
117729277
NCBI-ProteinID:
XP_034386103
Ensembl:
ENSCLMG00005003180
LinkDB
All DBs
Position
4:16545375..16593101
Genome browser
AA seq
796 aa
AA seq
DB search
MKITVDFEECLKDSPRFRATIEEVEGDVCELESKLDKLVKLCIGMIDAGKAYNAANKQFV
NGIRELAQQSTKDEVIESSLTKFAESLQEMINYHTILFDQAQRSIKTQLQTFVKDDIRKF
KEAKKHFDKVSEEKEGALIKNAQAPRNKQHEVEEATNILTATRKCFRHIVLDYVLQINVL
QSKRRSEILKSMLSFMYAHLTFFHQGYDLFSELQPLMKQLGGQLDQLVVDAAKEKRDMEQ
KHSTIQQKDFSNDDTKLEYNVDADNGIAMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQK
KFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQNSI
ATAFRDKGDEGEKLDRKSSTSTGSLDSGGELKEKPIKGESALQKVLAIPGNTCCCDCGQP
DPRWASINLGITLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELLKVMCELGNGAINQIYE
ARREELGSRKPQPGDPRHEVEAYIKAKYVDRRFVRRPTDEELRNKVVALSKQEKRLSSSS
EHLPPRPPPPTPKLRPGQSVKSADSGIQNSADGSREMLANTASTNSLTDADAAESPPMPM
PATLPPASPCKEIVFYEPKEYSSGLQLYWAACARSLPDMAEALAHGAEVNWVNTEDDKKT
PLIMAVQGGSLVTCEFLLQNAANVNQQDAQGRGPLHHATMLGHTGQVCLFLKRGANQNAA
DIDEKTPLTIAVDAANADIVTLLRLAKMNEEMREAEGPYSQSGDETYQDIFQDFTHMASN
DPDKLNRYQQYDPQRP
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgtggatttcgaggaatgtttgaaggactccccgcgattcagagctacc
atagaggaagtggagggggatgtgtgtgagttggaatccaagctcgacaaattggtgaag
ttgtgtattgggatgatagatgcaggaaaagcctacaatgcagccaacaagcagtttgtc
aacgggatccgggagctagcccagcagtccaccaaagatgaggtcatcgagtccagtctc
acaaaatttgccgagagcctgcaggagatgatcaactatcacacgatattatttgatcag
gcccagagatcaatcaagacccagcttcaaacatttgtcaaagatgacatccgtaaattc
aaagaagccaagaagcattttgacaaagtgagtgaggagaaggagggggccctgatcaag
aacgcccaggctccccgcaacaagcagcatgaggtggaggaggccaccaacatcctcact
gccacacgcaagtgcttccgacacatcgtcctcgactacgttttacagatcaatgtgcta
caatcaaagagaagatcggaaatcctgaaatcaatgttgtccttcatgtacgcccacctg
acgttcttccatcaaggctatgacctcttcagtgaactacaacctctgatgaaacagctt
ggaggacagttggaccagctggtggtggatgcagccaaagagaagagggacatggagcag
aaacactccaccatccagcaaaaggacttctcgaatgacgacaccaagctggagtacaat
gtggatgcagacaacggcatcgcaatggagggttatctgtttaagagggccagcaatgcc
tttaagacgtggaataggcgttggttctccatccagaacaatcagctagtttaccagaag
aaatttaaggacaaccctacagtggtggtagaagacctgaggctatgtaccgtcaaacac
tgtgaggacatagagcgtcggttctgtttcgaagtggtgtcgcccaccaagagctgtatg
ttgcaggcagactcagagaagctgcgacaggcctggatcaaagccgttcagaacagcatc
gccaccgccttccgcgacaagggagacgaaggcgagaagcttgataggaagtcgtccacg
tcgacagggagccttgattctggtggggagctgaaggagaagccaatcaaaggagagagt
gccctgcagaaggtcctggccatcccaggcaacacctgctgctgcgactgtggccagcca
gacccccgctgggccagcatcaatctgggcatcaccctctgtatacagtgctccggtatc
cacaggagtctgggagtgcatttctctaaggtccggtctttgactctggattcatgggag
ccagaacttctaaaggtgatgtgtgaacttggaaacggagcgatcaatcagatctatgag
gctcggcgagaggagctgggatccagaaaaccacaaccaggagatccgagacacgaggta
gaggcctacatcaaagccaaatacgtggaccggcggtttgtacgccggcctacagatgag
gagcttcgcaacaaagtggttgctctgagcaaacaggagaagaggctgagcagcagctct
gagcatctgcccccaaggccgccaccccccaccccaaagctccggcccggtcagtcagta
aaaagtgcagacagcggcatccagaacagcgctgatgggagcagggagatgctggccaac
accgcctccactaacagcctgacagatgcagacgccgcagagtctccccccatgccaatg
cctgcaacgctgcctcctgcgtctccatgtaaggagattgttttctacgagcctaaggag
tacagctcgggcctgcagctctactgggctgcatgcgcccgcagcctgccggacatggcg
gaggccctggcccacggagccgaggtcaactgggtcaacacggaggacgacaagaagacg
ccgcttatcatggcggtgcaggggggttcactggtcacctgtgagtttctgctccaaaac
gcagccaatgtgaaccagcaggacgctcagggccgaggacccctccaccacgccaccatg
ctgggacacacagggcaagtgtgtttattcttaaaaagaggagcaaatcaaaatgctgca
gacattgatgagaaaacccccctgacgatagcagtggatgcagccaacgcagacatcgtc
acactgttgcgattggccaagatgaatgaagagatgcgagaggcggaggggccctacagc
cagtcaggagatgaaacctaccaagacattttccaggatttcacccacatggcctccaat
gacccggacaagctaaaccgctaccagcagtatgacccccaacgaccctga
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