Cyclopterus lumpus (lumpfish): 117729281
Help
Entry
117729281 CDS
T09199
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03420
Nucleotide excision repair
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117729281 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
117729281 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
clum03051
]
117729281 (rad23ab)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117729281 (rad23ab)
Proteasome [BR:
clum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117729281 (rad23ab)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117729281 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Crinkler
UBA_3
Rad60-SLD_2
CUE
UBA_2
DUF1421
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
117729281
NCBI-ProteinID:
XP_034386111
LinkDB
All DBs
Position
4:41608..52546
Genome browser
AA seq
442 aa
AA seq
DB search
MLTVTVKTLQQQTFRVEIDPELTVEALKEEIEKDRGKDAFPAAGQKLIYAGKILNNDTPL
KEYNIDEKTFVVVMVSKPKPAPAAAAAPAQGPSTATRAASAPTHAQRSAACFEAPPPVPD
NNPPASLKATAAPDPDLAPDSTPAPASAATLASDPAPAPEAAADSPTPTTQPEEKLKDDR
ESEPSATSEVLLTAASLVDELGLLEEAASILVTGPAYENLVSEIMSMGYEREQVVAALRA
SYNNPDRAVEYLLTGIPAEAGDPPPQEQIGPSAPSNPPAPATQELQQPPATVTHTGPASG
SQPPSGGGGSVSTGNPLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQ
HQEHFVQMLNEPRGGDTAGEGAEAQGAPQTNYIQVTPQEKEAIERLKALGFPEGLVIQAY
FACEKNENLAANFLLQQTWDDE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggtgacggtgaagaccctccagcagcagacattcagggtcgaaatagaccca
gaactcacggtggaagccctgaaggaggaaatagagaaggacagaggaaaagatgcattt
cctgctgcaggacaaaaactaatctatgcaggcaaaatcctgaacaacgacacaccgctg
aaagagtacaacattgatgagaaaacctttgttgtggtcatggtttccaagcctaaacca
gcccctgcagctgcagcagctccagcacaaggaccctccacggcgacacgtgcggcgtct
gcacccacgcacgcccaacggtcggccgcttgcttcgaggccccgcccccagtcccagac
aacaaccccccggcttctctcaaagcaacagcagccccggaccctgacttagccccggac
tcaacaccggccccggcttcagctgccaccctggcctctgatccagcaccagctcccgag
gctgctgcggactcccccacccctactacccagccagaagaaaagctgaaggatgaccgc
gagagcgaaccatccgccacttccgaagtccttctcactgctgccagcctcgtagatgaa
ctgggtctccttgaagaagcagcgtctatactggtgacgggtccagcctacgagaacctg
gtgtcggagatcatgtccatgggttacgagcgggagcaggtcgtcgccgcgctcagagcc
agttacaacaacccggaccgagcagtggagtatctactcaccggtattccagcagaggcc
ggtgatccgccaccccaggagcaaattggaccaagtgctccgtccaacccccccgcccct
gctacgcaagaactccaacagcccccagcgaccgtaacacacacagggccagcgtccggc
agccagcctccctctggcggtggaggctccgtctccacggggaaccctctggagttcctg
aggaaccagcctcagttccagcagatgagacagatcatccagcagaacccggccctctta
ccggcccttttgcagcagctcggcagagacaacccacagctgctgcagcaaatcacgcag
caccaggagcattttgtgcagatgctgaatgagccacgaggtggagacacggcaggggag
ggagccgaggcccagggggccccacagacgaactacatccaggtcaccccacaggagaag
gaggccattgagaggttaaaagcactgggcttccctgaaggcttagtcatccaggcctac
ttcgcctgcgagaagaacgagaacctagccgctaacttcttgctgcagcaaacatgggac
gacgagtag
DBGET
integrated database retrieval system
