Cyclopterus lumpus (lumpfish): 117729285
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Entry
117729285 CDS
T09199
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729285 (ccdc50)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Others
117729285 (ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
117729285
NCBI-ProteinID:
XP_034386119
Ensembl:
ENSCLMG00005022412
UniProt:
A0A8C3AW66
LinkDB
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Position
4:18141032..18159369
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AA seq
636 aa
AA seq
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MAECDVSIDKNKLPGVKEVCKDFAVLEDHCLAYNLQEQEIESHLASNVNKSRLVQKDLQV
AKKLQEEEDERAKGQNQKQHTDIERQDNEIAQEIQDQLVRQAEQQLQQEEKDAAIARKLQ
EKEMKEEKKRQKQLEANFEEEYFEDHGAARRTLDLDKHTRHPSTSPNRYDAHAQLREDSH
RDYSPDYSSIEPKRSRYPKQDPAAPNSRSRNPDRHLVAEGGRSRHADPYPEHLLPSRGKH
GDRYPEYEPTETGKVRGPGREDTDRAVRRKDRPARPPPPQSPKEKAWDRKHDRERGRDLE
WERHMEKEQRRDREQDLRGARGRDRERSRDRVLSGDGRRERDRQKQKDKDGQRARTRSRE
RGLEEEPVHSRHCPRDGRASWEEGGADGEGEGRSRGRQRIQSGPEEVFDELDEQGGGHSH
PNGETGRIVHRVSGAVIAETAYGVSEATKGLTKLDIREQEHKDMEVARQMQEEEIKASKM
HVRTAQVAQDEEIARLMMEQEKKGYRKNREQENEREREREREKEKERERQERERERERQA
MERKAMERKAMEKKAMERRRPEGDYRSNAEEVVRPRTRDEYEHQRQRNHNKAAGPPQPRA
HDYENVNSGYGYSDHHASPRAPTRPEAAYKGAYQRR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtgacgttagcatcgacaagaataaactacctggagtgaaagaggtgtgc
aaagactttgctgtgctggaggatcactgcctggcctacaacctccaggaacaagaaatc
gaaagccacttggcgtccaacgtcaacaagagccgtctggtgcagaaggacctgcaggtg
gccaagaagctgcaggaggaagaggatgagagggccaagggccagaaccagaagcagcac
actgacatcgagcgtcaagacaatgagatcgcccaagagattcaggatcaactggtccga
caggcggagcaacaactgcagcaggaagagaaggacgcggccatcgctcgtaagctgcag
gagaaggagatgaaagaggaaaagaagagacagaagcagctggaagctaactttgaggag
gagtactttgaggatcacggagccgcaagaagaaccctcgacttggacaaacacacccgt
cacccatccacctccccaaatcgatatgatgcacatgctcaactgagggaggacagtcat
cgtgattactccccagattatagctcaatagagcccaaaaggagtcggtacccaaagcag
gacccagctgcacctaacagccgctccagaaatcctgaccgccacctagtggcagaagga
gggcgaagcaggcatgcagatccgtacccagaacacctgttgccctctagaggcaagcat
ggggacagatacccagagtatgagcccacagagactggcaaagtcaggggccctgggagg
gaggacacagacagagcggtgaggaggaaggacagaccagccagaccacctccaccgcag
agccccaaagagaaggcctgggatagaaaacatgaccgagaaaggggcagagacctggaa
tgggagaggcatatggaaaaagagcagaggagagacagggagcaggacctcaggggagca
agaggaagagacagggaaagatccagagacagagtactgagtggagacggacggagagag
agagacaggcagaaacagaaagacaaagacggacaacgagcgagaaccaggagcagggag
agaggacttgaagaggagccggtgcacagcaggcactgtccgagggatggcagggcttct
tgggaggagggaggggctgatggtgagggggaagggaggtcccggggccggcaacgtatc
cagtccggccccgaagaggtgtttgacgagctggacgagcagggtgggggtcattctcac
cccaacggagagacaggtcgtatcgtgcaccgggtgagtggagcagtgatagcggaaact
gcgtacggagtgagcgaggccaccaagggtttgacgaagcttgatatccgtgagcaggag
cacaaggacatggaggtggccaggcaaatgcaagaggaggaaatcaaggccagcaagatg
cacgtgcgtacagcccaagtggcacaggatgaggaaatcgcacgactgatgatggaacaa
gagaagaaggggtacagaaagaatagagaacaggagaacgagagagagagagagagagag
cgggagaaggagaaggagagggagaggcaggagagggagagggagagggaaaggcaggcc
atggagaggaaggcaatggagaggaaggcaatggagaagaaggcaatggaaaggaggcgg
ccagaaggagactacaggtcgaacgctgaggaagtcgtccggcccagaacacgagatgag
tatgaacaccagaggcagaggaaccacaacaaggctgccgggcctcctcagcctcgtgca
cacgactatgagaatgtgaactctggctacggctactcggaccaccatgcttcccctcgc
gctcccaccagacctgaggctgcttacaaaggggcctatcaaaggcggtga
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