Cyclopterus lumpus (lumpfish): 117729286
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Entry
117729286 CDS
T09199
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117729286
04020 Calcium signaling pathway
117729286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117729286
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117729286
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117729286
NCBI-ProteinID:
XP_034386121
LinkDB
All DBs
Position
4:19200185..19283263
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AA seq
2551 aa
AA seq
DB search
MLELGSSSVSSQSLTGDHNALGLPRAPSGEECSEGGLDMGAMCGSNTPRPHILHSSTTDS
ENWQKHRAGLAAGSSLLSESHSFLEPQSLSTSYDTLYLPHMSGHAALLHPNRLGLCLDVA
STLDVGAGMLGVDGDLAVSPNVMKRRRGGLIEQKDIVKAHQAHKIHSTPQARRKEWEMAR
FGDDVPGLLSPGDGGSERNRNRDGAAMSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKVIEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCLEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCTAQPGLLENETVDSSEYEVPCGVRRCPAKYTCSDTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPNWNWLYFVPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDALRSLPEWST
GGAYVLKRATTIKRRGMDGVHRGQPGEEQYGDMGIPMARASIRSAKRGPTAFFRRKERLL
RISIRRVVKTHTFYWTVLGIVALNTMCVAIVHHNQPLWLSNFLYYAEFLFLALFLTEMFL
KMYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKY
WASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAA
IMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSDGSRRRRPYLYRKRAIHRSRPT
YSCSLEEAHGSIREGRPRPPPPLNSSNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSR
EILFSGPSEEKDGTPVSAQTQQGPPLSLHRKAMEATQTGSLTDPLDSPSKNQASGSSMSV
DTPLDATLSGDVSEPPVVLETELLNATNVPLADVSVSVAISEPPESDSITESGKLNNQSH
NTVSKRPSPRLNGERQHRAVKKFRPPESFDTLTPEMGGHGGIRGRRAPHHCDHQSGARSQ
GSSSNGSHLASRSVSRERRRNPGKVEEKEAETKKEEELSKPDESRRSDMSEKGATEPPDN
QSHTGDQCPQTQEEHPQQSDPSPPVTLESNKDENETDQDQDQIQDKSQLSSSVIIDVPNA
QSSLELSTITVISKDPETCKSEREEADETKPVDPVNPDSMFIFKPDNPVRRACHYVVNLR
YFEMSILLVIAASSIALAAEDPVATSSNWNKVLRYFDYVFTGVFTFEMIMKMIDQGLILH
DGAYFRDLWNILDFIVVVGALVAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCSDSSKDTEKDCQGYY
IDYSKDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSH
GNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFSIGA
KPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHL
NTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLK
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNE
ETHITQHNNFKSFSGALMLLFRSATGESWQEIMLSCLGGQKCETDTSLSSAVPTSDQEGG
CGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDR
AASGRIHYTDMYEMLTNMSPPLGLGKKCPSKLAYKRLVLMNMPVDDDMSVHFTSTLMALI
RTALEIKIARGEEDRNQMDLDLQKEIGVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMM
IMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNAKSLSFLRHSAGSALTRGG
FLALSPISPQEMFLQPLSRSREEKEEEEDNDDNYRSPYHPYHHPHPHHHHLHTLVPEVLG
YNQVMQQARQDATAVKSPQRTASIRASSMPRLAVDPQPGISADSKLMKRSFSTIGNQCVN
GLLQEQHSLERVSPDGTYRPRQRSYRGPRINHGETSSHERGRSKERRHLLSPDVSRCNSE
ERSREPSCERRRSRSPSEGRTQTLQRQVNTSGSPAHSASVSGTPRNRRQLPQTPSRPRPY
ISYSPLVCQAHTSPTPAAPSEDQTQPQDGAGSSTGTAWKADKEGGPLIAPQGSTGGQVSG
PSNPSPHRYISEPYLPFHEGVSSRVAGDGQDTLTFETAVATSLGRANAICSAPQLRHSWQ
VPNGHYRKHLGQAGPAGASELLSDPDEDDRC
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcctcttcggtcagctctcagtctctgacaggggatcacaatgct
ttggggctaccgagagccccatcaggggaggagtgttcagaaggtggtctggacatgggg
gcgatgtgtggtagcaacaccccgaggccccacatccttcactcgtccacaacggacagt
gagaactggcagaagcatcgtgcaggactggccgcagggtcaagcctgttgtctgagtcc
cactccttcctggagccccaaagtctctcaaccagctatgacaccctctacctcccacac
atgtctggccatgctgcccttctacatccgaaccggctcggcctctgtcttgacgtggcc
tcgactttggacgttggagcaggaatgttaggggtggatggagatttggcggtcagtccc
aatgtgatgaagcgacgccggggcggcctgatagagcagaaggacattgtcaaagcccac
caggcgcataagattcacagcacaccacaggcacgacggaaggagtgggaaatggcccgg
tttggagacgacgtcccgggcttgttgagcccgggtgatggagggtccgagcgcaaccgg
aaccgcgatggggcggctatgtccacaggtggcatctcccctgccttcaagcagaccaaa
gcgcagcgtgcccgcaccatggccttgtacaaccccatcccggtcagggagaactgcttc
accgtcaacaggtccctcttcatctttggcgaggacaacgtggtcaggaagtacgccaag
aaagtcattgagtggcctccatttgagtacatgatcctcaccaccatcatcgccaactgc
atcgtcttggctctggagcagcaccttcctggagaggacaaaacccccatgtcgaagaga
ctcgagaagacggagccatacttcattgggatgttctgtttggaggctgggatcaagatc
atcgccctgggctttgtattccataaagggtcctacctcaggaatggatggaacgtcatg
gacttcattgtggtcctcagtgggatcctggccgctgcaggggcacatatgaacatctca
gtggacctgaggacgctgagggcggtgcgagtgctgcgacccctcaaactggtctcaggc
atcccgagtctgcagatagtcttgaagtcgataatgaaggccatggttcctctgctgcag
atcggcctgctgctcttttttgcaatcctcatgttcgccatcatcggcctggagttttac
agcggcaaactgcactacacctgcacggcgcagcctggactactggaaaatgagacggtg
gactcctccgagtatgaggtcccgtgtggcgtacgtcggtgtccggccaaatacacttgc
agcgatacttggattggcccgaatgacggcatcactcagtttgataacatcctgtttgct
gttctcaccgtcttccagtgcatcaccatggagggatggaccaccgtactctacaatacc
gacgatgccttgggccccaactggaactggctctacttcgtccctctcatcatcatcggc
tctttctttgtcctgaatcttgtgctgggagtcctctctggcgaatttgcaaaggagagg
gagagggtggaaaaccgcagggccttcatgaaactgagacgccaacagcagattgagaga
gagctcaacggctaccgggcctggatcgacagagcagaggaagtgatgctcgcagaggag
aataagaactcaggaccctcagccctcgacgctctcaggagcctcccagagtggagtaca
ggtggtgcctatgtgttgaagagagccaccaccatcaagaggagagggatggatggggtg
catcgagggcaacccggggaggagcaatatggcgacatgggcatccccatggccagagcg
agtatcaggagtgccaagcgaggtccaacagcatttttccgccgcaaggagcgtctcctg
cgcatctccatccgccgtgtggtgaagacacacacgttctactggacagtgctcggcatc
gtggctctcaacacgatgtgtgtggccattgttcaccacaaccagcctctctggctgtcc
aacttcctctactatgcagagttcctgttcctcgctctgtttctgactgagatgtttcta
aagatgtacagcttgggaccgcgtctctacttccattcctccttcaactgctttgactgc
agcgtgatcgttggcagcatctttgaagtgctgtggggtttcttcaggcccggcacttcc
ttcggcatcagtgtcctgcgtgctctccgtctgctgaggatcttcaagatcaccaagtat
tgggcgtctctgagaaacttggtcgtctctctgatgaactccatgaagtccatcatctcc
ctcatcttcctcctcttcctcttcattctcgttttcgcactccttggcatgcagctcttc
ggtggcaggttcatctttgaagactacaccccgacaaactttgacacttttcctgcagcc
atcatgacagtctttcagatcctgactggagaggactggaacgaggtgatgtacaacggt
attcgctctcaaggaggagtgaagtctggcatgtggtcctccatctactttatagtgctc
acactgtttggaaactacacactgctgaatgtcttcttggccattgctgtggataacctt
gctaatgcacaagaacttacgaaggatgaagaggaagccgaggcagcgttcaaccagaag
cacgctctccagaaggcgaaggaggtcggaccgttgtcctccttcatgtcttcagacgga
agccggaggaggcggccctacctgtacaggaaaagagccatccaccgcagccggcctacc
tactcctgctccctggaggaggcccatggcagcatcagggagggccgcccccgcccaccc
ccaccactcaactcctctaactctttcatgtccaggagagagagaagaaaaaggatgacc
atgtccgtgtgggagcagaggaccagccagctgcggcgacaccgccagatgtccagccga
gagatcctgttcagtggccccagcgaggagaaggacgggacccctgtttcagcccagacc
caacagggacctcccctgtcactgcaccgcaaggccatggaggccacacagactgggagt
ttgacagaccccttagactccccatccaagaaccaggcttcaggctcctccatgtcggtg
gatacgcctctggatgccaccctctctggtgacgtatctgaacccccagtggtcctggaa
accgagttactgaatgcgacgaacgttccccttgctgatgtttctgtgtctgtggccata
tcagagcctcccgaatcagactccatcaccgagagcggaaaactgaataatcagagtcac
aacaccgtcagcaagcgcccgagccccaggttgaatggcgagcgacaacaccgggcagta
aagaagttcagaccaccagaaagctttgacacactgacacctgagatgggcggtcatggt
gggatcaggggaaggagggcgccgcatcactgtgatcatcagagcggggccagaagtcag
ggatcatcatcaaatggaagccacttggcgagtcgctcggtcagcagagagaggaggaga
aatccagggaaagtagaggagaaggaggcagagactaaaaaggaggaagaactgtccaaa
cctgatgagagcagacggagtgacatgagtgagaaaggagccaccgagccaccagacaac
cagagccacactggtgaccagtgtcctcagacgcaggaagaacatccgcagcaatcagac
ccgtctcctcctgtcaccctagagagcaacaaagacgagaatgagacagaccaggaccag
gatcagatccaggacaaatctcagctcagctccagtgtaatcatcgatgtgcccaacgct
cagtcatctctggagctctccacaattacagtcatcagtaaggaccctgaaacctgtaaa
tcagagagggaggaggcagatgagacaaagccagtcgaccctgtgaatccagacagcatg
ttcatcttcaaacctgacaacccggtgcgccgagcgtgtcactacgtggtgaacctcagg
tactttgaaatgtccatcctgctggtcatagccgctagtagtatagcactggctgctgag
gaccctgtagccacctcctctaactggaataaggttctgcggtattttgattatgtgttc
accggagtcttcacatttgaaatgattatgaagatgattgaccagggtctgatcctccat
gatggcgcctacttcagagacctgtggaacatcctcgacttcatcgtcgtggtgggagcg
ttggtggccttcgccctctccaatgtgatgggaaacaacaaagggcgggacattaagacc
atcaaatctctgagagtgttgcgtgtcctcagaccactgaagaccatcaagagacttcct
aaactcaaggcggtgtttgactgtgtggtgacgtctctgaaaaacgtcttcaacatcctg
atcgtctataagctttttatgttcatttttgccgtcattgccgtgcagctcttcaaggga
aagtttttttattgcagcgacagttcgaaagacacagagaaagactgccagggttactac
atagactacagtaaggacaagaaagaggtgaagagacgagactggaagagacacgagttt
cactacgacaacgtcatctgggctctcctcactctcttcactgtttccactggagaggga
tggcctcaggttctgcagcactcagtggacgtgacagaggaggacagaggtccgagccac
ggcaacaggatggagatgtctatcttctacgtcatctacttcgtcgtctttcctttcttc
ttcgtcaacatctttgtcgctctcatcatcatcactttccaggaacagggtgacaagatg
atggaggagtgcagcctggaaaaaaacgagagggcgtgtatagacttttccatcggtgcc
aagcctctgacccggtacatgccccagaaccggcacacgttccagtaccgtctgtggcat
tttgtggtgtcgccctcttttgagtacaccgttctggccatgatcgctctcaacaccatt
gtactgatgatgaagtattactctgccccgccggcatacgaggccgtactgaagcacctg
aacacagctttcactgttctcttctctgttgagtgcgtcctcaagatcatggccttcggc
tttctgaactactttcgagacacgtggaacattttcgacttcatcactgtgttgggcagc
atcacagagattgtggtggacttgcagtttgttgatacgttcaacatgagtttcttgaag
ctgttcagagcagctcgtctgatcaaactgctcagacaaggttacaccatccggattctt
ctgtggaccttcgtccagtccttcaaggctttaccctacgtgtgcctgctcatcgccatg
ctcttcttcatctacgccatcattggcatgcaggtgtttgggaacattaagctgaacgag
gagactcacattacgcagcacaacaacttcaagagcttctctggtgctctgatgctgctg
ttcaggagtgccacaggggagtcatggcaggagatcatgttgtcttgtctcgggggacaa
aagtgtgagacagacacctcgctttcctcagccgtacccacgtccgaccaggaggggggc
tgtggctccgactttgcttatttctactttgtctcgttcatcttcttcagctccttcctg
atgctgaacctgtttgtggctgtgatcatggataactttgagtatctgaccagagactcc
tccatcttaggtcctcaccacctggatgagtttgtccggatctggggggagtatgaccgc
gctgcaagtggtcgtatccattacactgacatgtatgagatgttgaccaacatgtcgcca
cctctaggcctgggcaagaaatgcccctccaagttggcatataagagactcgtcctgatg
aacatgcccgtggacgatgacatgtccgttcacttcacctccaccctcatggccctcatc
cgcaccgccctggagatcaagatagccagaggagaggaggatagaaatcagatggacctg
gacctgcagaaggagatcggtgtcatctggcctcatctctctcagaagacgttagatctg
ctggttcccattcacaaagccagtgacatgactattgggaagatctatgccgccatgatg
atcatggactactacaagcagagcaaggccaagaagctccgacagcaactggaggaacag
aaacatgcgccgatgttccagcgtatggatgcctcctctctgcctcaagaaatcctatgc
aatgccaaatccctttcattcctcagacacagcgccggatctgctctaaccagaggaggt
ttcttggcacttagccccatctctccacaagagatgttcctgcagccgctgtcccgctcc
agggaggagaaggaagaagaggaggacaacgacgacaactaccgctcaccctaccaccca
taccaccacccacacccccaccaccatcatttacacacactggtaccagaagtcttgggg
tataaccaagtgatgcagcaggccaggcaggacgcaacagctgttaaatcacctcagcgg
acggcatctatcagagcgtcctccatgcccagattggctgttgatccacagcctgggata
tcagcagacagtaagctgatgaagcgctccttctcgaccatcggaaaccagtgtgtgaac
ggcctcttgcaggagcagcactctctggagagagtcagtcctgacggcacataccggcct
cgccagaggagctacagaggtcctcgaataaaccacggagaaacaagtagtcacgagaga
gggcgatctaaggaacggcgtcacctgctgtctccggacgtgtcccgctgcaactctgag
gagcgcagccgcgaaccatcgtgtgaacggagacggtcacgttctcctagcgaagggcgc
acacaaaccttacagagacaggtgaacacatcaggcagcccggcccattccgcctcagtg
tctggtactcctcgtaatcgccgccagctgccgcagacaccgtctcgcccgcgaccgtac
atctcctattcccctctggtctgccaagcccacacctctcccacaccagcagccccctct
gaggatcagacccagcctcaggatggcgccggtagctccacggggaccgcgtggaaggct
gacaaggagggcggccccctaattgcacctcaggggtcaaccggcggtcaggtttcagga
cctagcaacccatctcctcatcgctacatctctgagccctacctaccgttccacgagggc
gtcagcagcagggtggcaggcgacgggcaggatacccttacttttgagactgccgtggca
accagcctgggacgggccaatgctatatgctccgctcctcagctcagacactcctggcag
gttcctaacgggcattaccggaagcacttgggccaagcgggtccagctggagccagcgag
ctgctaagtgacccagatgaggacgaccgctgctaa
DBGET
integrated database retrieval system
