Cyclopterus lumpus (lumpfish): 117729295
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Entry
117729295 CDS
T09199
Symbol
sema6bb
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6B
KO
K06842
semaphorin 6
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF5671
Motif
Other DBs
NCBI-GeneID:
117729295
NCBI-ProteinID:
XP_034386144
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Position
4:complement(21446697..21571968)
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AA seq
915 aa
AA seq
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MYLSTTIIPPVNVQTQSPDEGHELQQDAARKSPEEIQLRRGVAMATVATPFFLLCWLLRA
ASSAFPEEPGPLNFIPTEVVRRHPVFLGRPHRTWLRQEPLHIQRILQVNRTLYIGARDDL
FRVELDIVGGDEMFYSKKRTWESNKNDIRICRMKGKHEDECRNFMKVLLSRQGGLFVCGT
NAFNPLCANYTGDTLEMVGDTVSGMARCPYDPKHANVARFAEGNLFTATVTDFLAIDAVI
YRSLGDSPALRTVKHDSKWFREPYFVSAVEWGPHIYFFFREIAMEFNYLEKVXKXCVSRV
ARVCKRDLGGSQRXLEKQWTSFLKARLNCSVPGDSHFYFNLLHSTSSIIRMHGRDIILGV
FSTPANSIPGSAVCAFDMEELAGVFEGRFKEQKSPESIWTPVPDEVIPKPRPGGCAVQGS
RFNSSNSFPDEMLNFVKTHPLMDEAVPSLGQRPWIVRTMARYQLNKIVVDTEAGPYRNQT
ILFLGSSRGTILKFLIMPNQDNTVTNSNIFLEELEGFNPEKCAGDSLQARQLLSLTLDSV
SHTLLLAFPSCVVRVPVARCQLYSRCMKNCISSRDPYCGWTRGSTCSFLRPGTRLPFEQD
VEQGNVAHLGDCDGLLLQESFIEEPDGLVSVNLLVVSAVSAFATGAVLSGLTVCWIMTHR
HRHSRGSGAGGTRRKSDKEQSMLGQGRSGSVMSVTRTSGGERRRSQVDNPFVMPNGWSKG
EMDPGLLPTPEQTPLQQKRSMRLPDSDWDQSQTFLTAVGTPCPNNSVIYLSSKFLHGGGG
GGGMVRIEDPGEVVLPPHTERQRYLILATQRGEHGGGRPSGTLRNSAGDYIYPATPQDSP
DRRRVVSAPTAHMDYGEPRWSHEALNYNSNNGVPYHSQRPGLIRPDMHGPRGLGELADFS
HLLGKNMGERTPSGQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtcaacaactataattcctccggttaatgtgcaaacccaatctcccgatgaa
ggccatgagctgcaacaagatgctgcaagaaaatctccagaagaaatccaactccgccgt
ggtgttgctatggcgactgtggccactcccttcttcctgctgtgctggctgctccgagcg
gcgagctcggcattcccagaggagcctgggcccctcaacttcatccccaccgaagtggtg
agaagacacccggtgttcctgggccgaccccaccggacatggctgagacaagagcctcta
cacatccagaggatcctccaagtcaatcggacactctacatcggagccagggatgacctt
ttccgcgtggagttggacatcgtcggaggagacgagatgttctacagcaagaaaaggacg
tgggagtcaaacaagaatgacatcaggatctgcaggatgaagggcaaacacgaggatgaa
tgccgtaatttcatgaaggtgctgctcagcagacagggaggcctgtttgtgtgcgggacc
aacgccttcaacccgctatgtgccaactataccggagacactctcgagatggtcggagac
acggtcagcggtatggcgagatgcccctatgaccccaaacacgcaaatgtagctcggttt
gcagagggaaatctgtttacagccaccgtgacagacttcctggccatcgatgcggtgatc
taccgtagccttggggacagtcccgctctgcgcaccgtcaagcacgactccaagtggttc
agagagccgtattttgtcagcgccgtggagtggggtcctcacatctacttcttcttcaga
gagatagccatggagttcaactacctggaaaaggtatagaagtgatgtgtgtcacgtgtg
gcgcgggtgtgcaaacgcgatctgggaggatctcagcgcngtctggagaagcagtggacg
tcgttcctgaaggcccgtctgaactgctccgtccccggtgattcccacttctactttaac
ctgctccactccaccagctccatcatcaggatgcacggcagggacataatcctgggggtg
ttctccacaccggcaaacagcatccccggttcggcggtgtgtgccttcgacatggaggag
ctggctggggtgtttgaagggaggtttaaggagcagaaatcacccgagtccatttggacg
cctgttccagatgaagtcatcccgaagccaagacccggtggctgtgctgttcaaggttcc
aggtttaattcctcaaactcgttccccgatgagatgctcaacttcgtcaagacccacccc
ctgatggacgaggccgtcccgtctctcggacaaagaccctggattgtcagaaccatggcc
aggtaccagctgaataagattgtggtggatacagaagccgggccttatagaaaccagacc
atcctgttcctcgggtcgagcagagggaccatcctcaagttcctcatcatgccaaaccag
gacaacactgtcaccaacagcaacatcttcctggaggaactggagggattcaaccctgaa
aagtgtgccggagactctctgcaggccaggcagctgttgtctctgactctggattcggtt
agccacaccctgcttctcgccttcccctcctgcgtggtcagagtaccagtggcacgatgc
cagctctactcccgatgcatgaagaactgtatctcctccagggatccttactgtggctgg
accagaggaagcacctgctctttcctcagacctgggaccagactgccgttcgagcaagat
gttgaacagggaaacgtggcccacttgggcgactgtgacggattgctgctccaagagagt
ttcatcgaggagcccgacggcctggtgtccgtgaacctgctggtggtgtcggctgtgtca
gccttcgcgacgggcgccgtcctctccggcctcaccgtctgctggatcatgactcaccgc
caccgccactcccgaggctccggagccggcggcacccgacgcaaaagtgacaaagagcag
agcatgctgggacagggccgcagcgggtcagtgatgagcgtgacgagaaccagcggcggc
gagaggcggcgttcgcaggtggacaaccccttcgtcatgcccaacggctggtcgaaggga
gagatggacccgggcctgctgcccaccccggagcagaccccactgcagcagaaacggtcc
atgcgtctcccagacagcgactgggaccagagccagaccttcctcaccgccgtggggact
ccctgccccaacaactctgtcatctacctgagctccaagttcctgcacggaggtggaggg
ggcggagggatggtccggatagaggacccgggggaggtcgtgctgcccccgcacacagag
cgccagcgctacctgatcctagccacccagagaggggagcacggcggcggtcggcccagc
ggcaccctgaggaactcggcgggagactacatctaccccgccacgccgcaggactccccc
gaccgacggagggtggtatccgctcccacggcccacatggactatggggagcctcgctgg
agtcacgaggcgctcaactacaacagcaacaatggagtgccctatcactcccagcgcccg
ggcctcatcaggccagatatgcacgggcctcgagggctgggagaactggcggacttcagc
catcttctagggaagaacatgggagagcgcacccccagtggccagtga
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