Cyclopterus lumpus (lumpfish): 117729314
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Entry
117729314 CDS
T09199
Symbol
btbd8
Name
(RefSeq) AP2-interacting clathrin-endocytosis protein
KO
K10480
BTB/POZ domain-containing protein 8
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117729314 (btbd8)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117729314 (btbd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
BTBD8_C
KLHL33-like_BTB_POZ
Motif
Other DBs
NCBI-GeneID:
117729314
NCBI-ProteinID:
XP_034386173
LinkDB
All DBs
Position
4:complement(9304944..9327331)
Genome browser
AA seq
1555 aa
AA seq
DB search
MITTEAAREFQAKERKHKEQLRRCLSSALSADLDRLLQEELEADVCLYAASGSLQAHRAV
LLARAPHVLRGQTHKDPSIVHLSGYELSGLKDFLRRLYTADQSLRSSEIIPDLKHSVPQS
DSPVPDPADLHSSSDSDAALEPASGLGADLLDLYQRGEQCDITIQVAEQVFSCHRAILCA
RSQYFRAMLSGSWMESSRQCITLQGLGPDEMEILLQFMYGAIVDLPPGASASQVVLAADM
LGLEGLKDVVEMVLTRDYCRFFPKPIDGVQKTVLECLSLTHTLGLQNLHMLCKRWVADHY
VKTWCERNFSLLSPELHVACLTAITETMTVQSAVTMLSGTEQLLGSLPEVKWAQQVRSLA
TELQEESLHVIVQHLPGVIGTQAFQDLCRREEFTREPTLLKKLCSAIREGVTVDNCCELF
AAVHLLCGDDMEEEGCQKPEEPFRQQICTLRSRLWTFLLQTFYAVRHTQGWETLSSKHRE
RILADAIDKGDNRRLGKKPVFTSAQSRAVKCPSTAPESPPVHRTQRVSENATSVSRSAAS
VMKSDGLGTATKPVEGHTSKAKNAKKPGDRSVVAKAKAATAGAPVVNGTGAAGARRDVAS
ANGSRSSHGAREQEKKSNPGARPKTSPPSYTSTSQTGAMKAQRSSAGKADGTVGTSKAQP
STSSTSGSASPENGASSPRNDTHSIPGAKPKHQAKAVNKSPLTKPPQKSDPAKISSPTNK
SSASESAKVKTGAAEKASAGGTAAKADAKGRGPPDHHVSKHGSSVKKPSSPRKEDGKDGL
KSSTPDKAASEAHKKKITKPASATGASAKSSAKPPKTSQAPSKQSSVVAAKSGPKTKSAI
DLSAEKASPKSGGTSRTSASSASKKSGTKGKEAMNGNNSDCQTEPAPSENAGDVATHEGS
TEIALSDQPASRSAHPTSQSGGDSLSLKPDASPKQSLRKSEIQSRNTTSSPAAHKPPHGK
CANAVTCKKAEGNKARQSPSGVVPAHISGIHEVGSPNSSRDTPCSMGGTDTPVEDSSWSG
THHQVSPESETGSTHTTSSDDIKPRSEDYDAGGSQDDDCSNDRGVSKCGTMRCHDFLGRS
SSDTSTPEELKMYEGGAGLRVEVRLRGREAETTSEEEAVRQHLRSWLHRDEVPVEEEHSE
VEATVTVKSVPDPQLFSSEEEEEDEDEEATEDERSEVEVIPGPPPTEPSPLFQGIVNLAF
DDDTMNQENDQPDYQSTSNFRRSVLLSVDECEELGSEEGGVQTPPQQPEDGVTPCDVFES
DGTAPQSNSAPPVSNQQNRLPRRPESADGKREQRGNEKSPVFLTEIREPAQEEGNGVKSS
GPLLDADARDLPPQERPCHLDLRHTEQYNGGLRKNHTNPSESKKADLHLDLNEPQLTGDS
PVNAAQSPAGDNGCDRLDQTCKHDRRPSKALSPIYETDVGEAFERCPDRDRDVSVKAEDE
EQSGAGDESNEFAERDWSLLRRLLSDHESNLGIINPVPEELNLAQYLIKQTLSLSRDCLD
SQGFLSPEKETFKRWAELISPMEDSSTSITVTSFSPEDAASPQGEWTIVELETHH
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccacagaggctgcaagggagttccaggccaaggagcgcaaacacaaagagcag
ctgaggagatgtttatcatctgctttatctgcagaccttgacaggttgctgcaggaggag
ctggaggcagatgtctgtctgtatgccgcgtctggctcgctccaagctcacagagccgta
ctgttggccagagctcctcatgtccttcgtgggcagacgcacaaagatccctccatcgtt
catctgtccggctatgagctgtccgggttgaaagatttcctcaggcgactgtacacagcg
gaccagagcctgcgctcgtctgaaataatcccagacttgaagcactcggtaccgcaaagt
gattcgcctgttccagacccggcagacctccatagttcctctgactcagatgctgctctt
gagccggcctcgggcctcggagcggacttgctggatctgtaccagaggggggagcagtgt
gacatcaccatccaagtagcggagcaggtcttctcctgccacagggcaatcctgtgtgcg
cggtcccagtacttccgagccatgctgagcgggagttggatggagagctccagacagtgc
atcactctgcaaggtttagggccagatgagatggagatcctgctccagttcatgtatgga
gccattgtggatctgcctcctggagccagtgccagtcaggtggtgttggcggcagacatg
ttgggtttagagggactgaaagatgtggtggagatggttctgacccgagactactgccgc
ttcttccccaagccaattgacggggttcagaaaacggttctcgagtgtctgtcgctcacg
cacaccttaggccttcaaaacctccacatgctgtgtaagaggtgggtggctgatcactat
gtgaagacctggtgcgagaggaacttttccctcttgtccccggagctccacgtagcctgt
ctaacggccataactgaaaccatgacggtgcagagcgcggtgaccatgctctctggcacc
gagcagttgctcggcagcctcccagaagtcaagtgggcccagcaggtgaggagtctcgcc
acagagctacaggaggagagcctgcatgtcattgtccagcatctccccggagtcatcggc
actcaggccttccaggacctgtgcaggagggaagagtttacccgcgagcccacgttgttg
aagaagctgtgttcggccatccgggaaggtgtgactgttgacaactgctgtgagcttttc
gccgcggtgcacctactgtgtggcgatgacatggaggaggaagggtgtcaaaaaccagag
gagccgttcaggcaacagatttgtacgctgcgcagtcggctgtggaccttcctgcttcag
accttttacgccgtccgccacacgcagggatgggagaccctgtcctccaaacacagagag
aggatactggcagatgccattgataaaggagacaatcgaagacttggcaaaaagcctgta
tttactagcgcacagtccagggctgtaaaatgcccttcaaccgcacctgagagtcctcct
gtgcacaggacacagagggtgtccgaaaacgcaacctctgtatcccgtagtgctgcgtcg
gtcatgaagtctgatggactggggacagctaccaaaccggtagagggtcacacatccaag
gcgaagaacgcgaagaagccaggagaccggagtgtagtagcaaaagcaaaggcggcgaca
gccggtgcgccggttgtcaacggcacaggagccgcaggggccagacgggacgtagccagc
gccaatggctccagaagctctcatggcgccagagagcaagaaaagaagtcaaaccccggt
gcgaggcctaaaacatctcccccgagctacacgtctacaagccagactggggcaatgaag
gctcaaaggagctcagcgggaaaggctgacggcacggttgggaccagcaaagctcagccc
agcacctcctccacatcaggcagcgcctcgccagagaacggtgccagcagccctcgcaat
gacacccactccatcccaggtgcgaagcccaaacaccaggctaaggcggtgaacaagtcg
cccctgacaaaacctcctcagaaatccgatccagcaaagatcagcagtcctaccaataag
tcaagtgcgagtgaaagtgccaaagtcaagactggtgcagcggagaaagcgtccgctgga
gggacggcagcaaaggcagacgccaaggggagaggcccaccagaccaccatgtctcgaag
catggatcctccgtgaaaaagccgtcctcccccaggaaagaagacggcaaagacgggttg
aaatcctcaacaccggacaaagcagccagtgaagctcataaaaagaagatcacgaaaccc
gcttcggcgactggcgcctcagctaaatccagtgctaaaccaccaaaaacctctcaagcc
ccatccaagcaatcttcagttgtagctgccaagtctggaccaaagacgaaaagcgccatc
gatttatctgcggagaaagcttctccaaaatccggaggaacctccagaacctcagcttcg
tcggcctccaagaaatcaggaaccaaagggaaagaggcaatgaacggtaataattcagac
tgtcaaactgagccggcgccatctgaaaacgctggggacgtcgcgacacatgaaggaagt
acggagatagcgctctccgaccagcctgcatcgcgcagtgcacatccaacaagccagagt
ggaggggattcactcagccttaaaccggacgcaagccccaagcagagcctccggaagtct
gaaatacagtcacgaaacactacgagttcaccagcagctcacaaacccccccatggcaaa
tgtgctaacgcggtaacttgcaaaaaggctgaaggaaataaagcgagacagtctccaagc
ggtgtcgtcccagctcacatcagcgggattcacgaagtcggctccccaaattcttccaga
gacaccccctgcagcatgggaggcaccgacactcccgtagaggactcctcctggagcggc
acccaccatcaggtcagcccggagtccgagaccggcagcacacacaccacatcctccgac
gacatcaagccccgctcggaggactacgacgcaggcggctcgcaggacgacgactgctcc
aacgacaggggcgtgtccaaatgtggcaccatgcgctgtcatgacttcctgggccgcagc
agcagcgacacgagcaccccagaggagctcaagatgtacgagggcggggccggcttgagg
gtggaggtgcggctgcgcgggcgggaggcggaaaccaccagcgaggaggaagcagtgagg
cagcaccttcgctcctggttgcatcgagacgaggttcccgtcgaggaggagcactcggag
gtcgaggccaccgtgactgtgaaaagcgtgcccgacccgcagctcttttcctctgaggag
gaagaggaggacgaagatgaggaggcaacggaagacgaaaggtctgaagtcgaggtgatt
ccgggcccgccgccaaccgagccctcgccgctgttccaggggatcgtcaacctggctttc
gacgacgacaccatgaaccaggagaacgaccagcccgactaccagtcgacgtccaacttc
cggcgctcagtgttgctctccgtcgacgagtgcgaggagctgggctcggaggagggcggc
gtccaaactccaccccagcagcccgaagacggcgtgaccccctgtgacgtgtttgagtcc
gacggcacggcgccccagtccaactccgcccctcccgtcagcaaccaacagaaccgcctg
ccgcggcgcccagaaagtgccgacggtaagcgcgaacaacgcggaaacgaaaaatccccc
gtgttcctcaccgagatccgggagcccgcgcaggaggagggcaatggagtgaagtccagt
ggccctctcctggacgctgacgcgagggacctccctccccaggagcgcccgtgccacctg
gatctgcggcacactgaacaatacaacggagggctgcgcaaaaatcacaccaatccctca
gaaagcaagaaagctgatttacatctagacttaaatgagcctcagctgacaggggactct
cctgtaaatgctgcacaatctccagcaggggacaatggttgtgacagattggatcaaacc
tgcaaacatgaccgccggccgtccaaagccctctctcccatttacgagacggatgtggga
gaagcgtttgagcgctgcccggacagggacagggacgttagtgtgaaggccgaggacgag
gagcaaagcggggccggcgacgagagcaatgagttcgccgagcgggactggagcctgctc
aggcggcttctctcggaccacgagtccaatctgggcatcataaaccccgtgcccgaggag
ctcaacctggcccagtacctgatcaagcagactctgtcgctgtcgcgcgactgcctagac
tcgcagggcttcctgtccccggagaaggagaccttcaaacgctgggcggagctcatctcg
cccatggaggactcctccaccagcatcacggtgaccagcttctccccagaggacgctgcc
tctccacagggggagtggaccatcgtggagctggaaacgcatcactga
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integrated database retrieval system
