Cyclopterus lumpus (lumpfish): 117729354
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Entry
117729354 CDS
T09199
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117729354 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117729354 (trim25)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117729354 (trim25)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117729354 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
Motif
Other DBs
NCBI-GeneID:
117729354
NCBI-ProteinID:
XP_034386244
Ensembl:
ENSCLMG00005004085
UniProt:
A0A8C2WRA3
LinkDB
All DBs
Position
1:complement(14203098..14213297)
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AA seq
755 aa
AA seq
DB search
MAAVDESPFSLISLEDELTCSICLSPFDCPVTIPCGHNFCQDCLLATWKDSYSCPQCRTH
FATKPELKKNTVLSSVVQTFSLRSKSKSKSKSEATLIAEESEAEKEDVIRCDTCMEAEAS
QTCLTCMASFCEEHLRPHRENPTFRLHQLSQPLGDLSERICPDHHKLMELFCSQHSRPIC
SLCLQQVHKGCSFISPEEKRNLTESDLRGKLDLLDGKITKNENVIRQMGDMQNNLKDSAT
NRKKALVAEYQQIQDMLAREERESLNAVDRELEGGQTKLKGLAKRFTENVNNMSKAKEEI
HSLLSQSQTLAFLQASFDLPPAVNFEPSIPRISLDSKNVTATQAFSALLKEYLTEILKQP
VKARLLLLKPEFKTDIVASDEKAVPGSTPASSGSTGSHPESEVTKPPKQKRQPRSRSSGR
VPIPLLQPFRRPYMEPPAGWNPHQHPHGSYMAPPFMDPSFMGGHKTNINTGILGAYKEVL
PVSWSSEPPWTGPGPQPKSGPKKKPQQPKPPQATEDHMGKGNLDHSMENLIDFGGKDKSK
GCTPAAKSKETAETTDIPPNITSAIPRTELLKYSTILTLDPKTAHKRIALTENFTKASVS
DEQTNYPDCPERFAVCSQVLASKGFSRGRHYWEVKLSSNNFIGIGLAYSSIDRKGPTSRL
GRNGQSWCVEWFNVKLSAWYNSSETVLVNPNPKRIGVLLDCEVGTATFYNVADRAYPFHS
FVFPFAEAVYPAFWIFSSGSSASLCKLQPSGADAN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggacgagagtccgttttctctgattagtctggaggatgagctgacctgc
agcatctgtctgagtccctttgactgcccggtgaccatcccctgcggacacaacttctgc
caggactgcctcctcgccacctggaaggactcctacagctgtcctcagtgtcggacccac
ttcgccaccaaaccggagctgaagaaaaacacggtcctcagcagcgtcgtgcagaccttc
agcttgaggagcaagagcaagagcaagagcaagagcgaagccaccctgatagcagaggag
agcgaagccgagaaggaggatgtcatacgttgtgacacatgcatggaagcagaagcgtcg
cagacctgcctcacctgcatggcctctttctgcgaggagcacctgcggcctcaccgggaa
aaccccacctttaggctccaccagctgagtcagcccctcggcgacctgtcggagcggatc
tgcccggaccaccacaagctgatggagcttttctgcagccaacacagccgtcctatctgc
agcctctgccttcagcaggtgcacaagggctgctccttcatatcccccgaggagaagagg
aacctgacagagtccgacctgaggggcaaattggatttgctggacgggaagataacgaag
aatgagaatgttatacgtcaaatgggtgacatgcagaacaacctaaaggactcagcgacc
aacaggaagaaggctttggtagcggagtatcagcagatccaggatatgttagcacgagag
gagcgtgaatctctgaatgcagtggaccgcgagctggagggtggtcagactaaactcaag
ggtctcgcaaagaggttcactgagaacgttaacaatatgagcaaagccaaagaagagatc
cacagtctgctgagtcagtcccaaactctggccttcctacaggcttcatttgacctgccc
ccagctgtgaactttgagccttccatccctcgaatcagcctggactccaagaatgtgaca
gcaacacaggcattttctgctctcttgaaggagtatctgacagagatccttaaacagcct
gttaaggccagactcctcttacttaaaccagaatttaagactgacattgttgcatctgat
gaaaaagcagttcctggctcaacacctgcaagttctggaagtactggatctcatccagaa
tctgaagtaaccaagcctccaaagcagaaaagacagcccaggtcccgcagttcaggtcgt
gtacccatcccattacttcagccatttcgtaggccttatatggagccaccagcaggctgg
aatccacatcagcatccacatggctcctatatggctcctccatttatggatccttcattt
atgggaggacataagacaaatataaacactggcatacttggagcgtataaagaggttcta
cctgttagctggtcttctgagccaccatggacaggtccaggtccccaacccaaatcgggc
ccaaagaagaaacctcaacaaccaaaacctccccaagccacagaagaccacatggggaaa
gggaatcttgaccattcaatggagaacctgatcgatttcggtgggaaagacaaatccaaa
ggctgtactcctgcagctaaatccaaagagacagcagaaacaacggacattcccccaaac
ataacatcagctataccaagaaccgaacttctgaaatatagtacgatactcactttggat
ccaaagacggcccacaaacgcattgcactgacagagaacttcactaaggcatctgtgtca
gatgaacagaccaactaccccgactgccctgaacgcttcgccgtctgctcccaggtgctg
gcctccaagggattctctagaggacgccactactgggaagtcaaactgagcagcaacaac
ttcattggcatcggcttggcttacagcagcattgaccgcaaaggtcccaccagtcgactg
ggccgcaatggccagtcctggtgtgtcgagtggttcaacgtcaagctgtcagcttggtat
aacagcagtgagactgtgctagtcaatcccaatccaaagcgcattggtgtgctgttggat
tgtgaggtgggtactgctacgttctataacgtggcagacagggcatatcccttccactcc
tttgtgttcccctttgctgaagctgtgtatccagctttctggattttctcaagtggctcg
tctgcttctttgtgcaagctgcagccatcaggagcagatgcaaattga
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