KEGG   Cyclopterus lumpus (lumpfish): 117729354
Entry
117729354         CDS       T09199                                 
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    117729354 (trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117729354 (trim25)
Enzymes [BR:clum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117729354 (trim25)
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117729354 (trim25)
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-B_box zf-RING_5 RING_XB3-XBAT31 ANCHR-like_BBOX U-box
Other DBs
NCBI-GeneID: 117729354
NCBI-ProteinID: XP_034386244
Ensembl: ENSCLMG00005004085
UniProt: A0A8C2WRA3
LinkDB
Position
1:complement(14203098..14213297)
AA seq 755 aa
MAAVDESPFSLISLEDELTCSICLSPFDCPVTIPCGHNFCQDCLLATWKDSYSCPQCRTH
FATKPELKKNTVLSSVVQTFSLRSKSKSKSKSEATLIAEESEAEKEDVIRCDTCMEAEAS
QTCLTCMASFCEEHLRPHRENPTFRLHQLSQPLGDLSERICPDHHKLMELFCSQHSRPIC
SLCLQQVHKGCSFISPEEKRNLTESDLRGKLDLLDGKITKNENVIRQMGDMQNNLKDSAT
NRKKALVAEYQQIQDMLAREERESLNAVDRELEGGQTKLKGLAKRFTENVNNMSKAKEEI
HSLLSQSQTLAFLQASFDLPPAVNFEPSIPRISLDSKNVTATQAFSALLKEYLTEILKQP
VKARLLLLKPEFKTDIVASDEKAVPGSTPASSGSTGSHPESEVTKPPKQKRQPRSRSSGR
VPIPLLQPFRRPYMEPPAGWNPHQHPHGSYMAPPFMDPSFMGGHKTNINTGILGAYKEVL
PVSWSSEPPWTGPGPQPKSGPKKKPQQPKPPQATEDHMGKGNLDHSMENLIDFGGKDKSK
GCTPAAKSKETAETTDIPPNITSAIPRTELLKYSTILTLDPKTAHKRIALTENFTKASVS
DEQTNYPDCPERFAVCSQVLASKGFSRGRHYWEVKLSSNNFIGIGLAYSSIDRKGPTSRL
GRNGQSWCVEWFNVKLSAWYNSSETVLVNPNPKRIGVLLDCEVGTATFYNVADRAYPFHS
FVFPFAEAVYPAFWIFSSGSSASLCKLQPSGADAN
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggcggcggtggacgagagtccgttttctctgattagtctggaggatgagctgacctgc
agcatctgtctgagtccctttgactgcccggtgaccatcccctgcggacacaacttctgc
caggactgcctcctcgccacctggaaggactcctacagctgtcctcagtgtcggacccac
ttcgccaccaaaccggagctgaagaaaaacacggtcctcagcagcgtcgtgcagaccttc
agcttgaggagcaagagcaagagcaagagcaagagcgaagccaccctgatagcagaggag
agcgaagccgagaaggaggatgtcatacgttgtgacacatgcatggaagcagaagcgtcg
cagacctgcctcacctgcatggcctctttctgcgaggagcacctgcggcctcaccgggaa
aaccccacctttaggctccaccagctgagtcagcccctcggcgacctgtcggagcggatc
tgcccggaccaccacaagctgatggagcttttctgcagccaacacagccgtcctatctgc
agcctctgccttcagcaggtgcacaagggctgctccttcatatcccccgaggagaagagg
aacctgacagagtccgacctgaggggcaaattggatttgctggacgggaagataacgaag
aatgagaatgttatacgtcaaatgggtgacatgcagaacaacctaaaggactcagcgacc
aacaggaagaaggctttggtagcggagtatcagcagatccaggatatgttagcacgagag
gagcgtgaatctctgaatgcagtggaccgcgagctggagggtggtcagactaaactcaag
ggtctcgcaaagaggttcactgagaacgttaacaatatgagcaaagccaaagaagagatc
cacagtctgctgagtcagtcccaaactctggccttcctacaggcttcatttgacctgccc
ccagctgtgaactttgagccttccatccctcgaatcagcctggactccaagaatgtgaca
gcaacacaggcattttctgctctcttgaaggagtatctgacagagatccttaaacagcct
gttaaggccagactcctcttacttaaaccagaatttaagactgacattgttgcatctgat
gaaaaagcagttcctggctcaacacctgcaagttctggaagtactggatctcatccagaa
tctgaagtaaccaagcctccaaagcagaaaagacagcccaggtcccgcagttcaggtcgt
gtacccatcccattacttcagccatttcgtaggccttatatggagccaccagcaggctgg
aatccacatcagcatccacatggctcctatatggctcctccatttatggatccttcattt
atgggaggacataagacaaatataaacactggcatacttggagcgtataaagaggttcta
cctgttagctggtcttctgagccaccatggacaggtccaggtccccaacccaaatcgggc
ccaaagaagaaacctcaacaaccaaaacctccccaagccacagaagaccacatggggaaa
gggaatcttgaccattcaatggagaacctgatcgatttcggtgggaaagacaaatccaaa
ggctgtactcctgcagctaaatccaaagagacagcagaaacaacggacattcccccaaac
ataacatcagctataccaagaaccgaacttctgaaatatagtacgatactcactttggat
ccaaagacggcccacaaacgcattgcactgacagagaacttcactaaggcatctgtgtca
gatgaacagaccaactaccccgactgccctgaacgcttcgccgtctgctcccaggtgctg
gcctccaagggattctctagaggacgccactactgggaagtcaaactgagcagcaacaac
ttcattggcatcggcttggcttacagcagcattgaccgcaaaggtcccaccagtcgactg
ggccgcaatggccagtcctggtgtgtcgagtggttcaacgtcaagctgtcagcttggtat
aacagcagtgagactgtgctagtcaatcccaatccaaagcgcattggtgtgctgttggat
tgtgaggtgggtactgctacgttctataacgtggcagacagggcatatcccttccactcc
tttgtgttcccctttgctgaagctgtgtatccagctttctggattttctcaagtggctcg
tctgcttctttgtgcaagctgcagccatcaggagcagatgcaaattga

DBGET integrated database retrieval system