Cyclopterus lumpus (lumpfish): 117729380
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Entry
117729380 CDS
T09199
Symbol
ap3d1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117729380 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729380 (ap3d1)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
AP-3 complex
117729380 (ap3d1)
Endosome - Golgi transport
117729380 (ap3d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RTP1_C1
RasGEF_N_2
SR-25
Vac14_Fab1_bd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
117729380
NCBI-ProteinID:
XP_034386279
Ensembl:
ENSCLMG00005013594
LinkDB
All DBs
Position
4:20139074..20162617
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AA seq
1260 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRVFAVAQMATLLDNAHLMTGNVQRKGICE
VLYAAAWICGEFSEHLENPMQTLEAMLRPKVATLPGHIQAVYVQNAAKLFATLLKNQEGN
TDRTAAQETSQLMIDRLPLFVQSANLEVQERASCILQLVKYIQKLQQKDVEVAEEVIALF
AGELNPVAPKAQKKVPVPEGLDLDAWINEPPSESESEDEQPKAIFAKEEPKHSRARHTEV
DEKELAKRREARKQEQANNPFYIKASPSSQKVYQEAPGVEHIPVVQIDLSVPLKVPGLPM
SDQYVKLEEERRQKERVEKKKKEKKKRKEKRGGRGKKHDSGPESEEDITPAHMVDIVTEE
MPENALPSDDDDKDPNDPHKALDIDLDNLVEMAGRRPLADSEKLPVRSHRAAEALKSPAE
DGDAESPASQEPKKKSSKEKREKKKDKDGDRKKSKDDKKKKKKHKREEKGEDLFGGQADE
PVVQSEEISEVAAPPASNAAEVSDLDFWLSNAPVPSNAQEAATLAAEAAPVPEKASGTAP
DSEPDEPEETDKKSSKHKKKKQKREKEEKEKKKKKKHHHHHHHSDGGGEESVQNGTVEEE
EPLPPMSNYCLLAENSYIKMEIDIQGNLQDGSQVVVSVIFENKCDNFLKTMEFNVLDSLN
SKLQRPEGSGPHDGLSVPFQLPPGVSNEARFVFTMQSIVMPQKLKGTLTFIIKNEDSSTH
EKLDFKLHFTCSSYLITTPCYSDAFAKLLESGDLKCSSVRLEGVNMPFHHLLARICFHHH
FSVVERIDSCASMYSRSIQGHHVCLLVKTSGQTVSIDAKCDEPTLLGNVLDEIKQTFSQC
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgtcaaagggagcatcgatcggatgttcgataaaaaccttcaggat
ttagtacgtggcataaggaaccacaaggaagacgaggccaagtacatctccacatgcatc
gatgagatcaaacaggagctcaagcaggacaacatcgctgtcaaagctaatgctgtgtgc
aagctcacctacctccagatgctgggctatgatgtcagctgggccgctttcaacatcgtt
gaagttatgagctcttccaagttcacatacaagaggattggctacctggcggcctcacag
tgctttcacgagagcactgatgtcatcatgctgacaaccaatcagatccgaaaggatctc
agcagtcccaaccagtatgacacaggtgtggccctcaccggcctctcttgttttgtgact
cctgacctggctcgggacctggccaatgacatcatgacactgatgtctcacactaaaccc
tacatcagaaagaaagcggtgctgatcatgtacaaggtgtttctgaagtacccagagtcc
ctgcgacccgctttccccaggctcaaggagaaactggaggacccagacccaggtgtccag
tctgcagcagtaaatgttatctgtgagctggctcggagaaatcccaagaactacttgtct
ctggccccgctcttcttcaaactcatgacctcttctactaataactgggttctcattaag
atcatcaagctgttcggtgcgctcactcctctggagccacggttggggaagaagctgatc
gaacctctgaccaacctaatccacagtacctctgccatgtctctgctgtatgaatgtgtc
aacactgtgattgcagtgttgatttccttgtcctctgggatgcctaaccacagtgctagt
atccagctctgtgtgcagaaactgcgaatcctgatcgaagactcggaccagaacttgaag
tacctgggcctgctggccatgtcaaagatcctaaagactcaccccaagtcagtgcagtct
cataaagacctcatcctccagtgtctggatgacaaggacgagtccatccgcctgagagct
ctggacctgctctatggcatggtatccaaaaagaacttaatggagattgtaaagaagctg
atgctgcatgtggacaaagccgaaggaaccacctacagagacgagctgctcaccaagatc
atagacatctgcagccagagcaactaccagtatatcaccaactttgaatggtacatcagc
atcctggtggagctgactcggttagagggcacacgccacggccacctcattgcttctcag
atgctggatgtggctattcgggtcaaagccatccgggtctttgccgtggcccagatggcc
actctgctggacaacgcccacctgatgacgggcaacgtgcagcggaagggcatctgtgag
gtgttgtacgcagcagcctggatctgcggcgagttctctgaacacctcgagaacccgatg
cagacgctagaggccatgctgcggcccaaggtggccaccctaccgggccacatccaggca
gtgtacgttcagaacgcagccaagctgtttgccactttgctgaagaaccaggaggggaac
acggaccgcacggcagcacaggaaaccagtcagctgatgatagacaggctgccgctgttt
gtccagagcgccaacctggaggtgcaggagagggcgtcttgcatcctgcagctggtcaag
tacatccagaaactgcaacagaaggacgtagaagtagcggaggaagtcattgctctgttc
gctggagaactcaaccctgtcgcccccaaagcacagaaaaaagtgcctgttcctgaaggt
ctggacttggatgcctggatcaacgagcctccatctgagagtgagtctgaggacgagcag
cccaaggctatttttgccaaggaggagcccaaacactcccgcgcccgtcacacagaggtg
gacgagaaggagctggcaaagaggagagaagccagaaagcaggagcaagccaacaacccg
ttctacatcaaagcctccccatcctctcagaaggtgtaccaggaggctccaggcgtggag
cacattccagtcgtgcagattgacctcagtgtgcctctcaaagtcccaggtctgcctatg
tctgaccagtacgtgaaactggaggaggagcgtcgtcagaaagagagagtagagaagaag
aagaaggagaagaagaagcggaaagaaaagcgcggcggacgagggaagaaacatgattca
ggccctgagagcgaggaggacatcacgcctgcgcacatggtcgacattgttaccgaggag
atgccagagaatgccttacccagtgatgatgatgacaaggaccccaatgaccctcacaaa
gccctggacatcgaccttgacaacttggtggagatggctgggcgcaggccacttgccgac
agtgagaagctgccagtcaggtcacatcgtgcagccgaggctctcaaaagtccagctgaa
gatggcgatgcagagagtcccgcttcacaggagcccaagaagaagagcagcaaagaaaag
agagagaagaagaaggacaaagacggggatagaaagaaaagcaaagatgataaaaagaag
aagaagaaacacaaacgtgaagaaaagggggaggatctgttcgggggtcaggcagacgag
cctgtggtccaatcggaagaaatcagtgaggtggctgcaccacccgcctccaacgctgct
gaggtttcagatctggatttctggctctcaaacgctccagtgccctctaacgcccaggaa
gcagccaccttagcagcagaagcagcccccgtgcctgagaaggcctctggcacggcacca
gactcagagcctgatgagccagaggagactgataagaagtcctccaaacacaagaagaag
aagcagaaaagggagaaggaggagaaggagaagaaaaagaagaagaagcatcatcaccat
catcaccacagtgacggtggtggcgaggagtcggtgcagaatggcaccgtggaagaggaa
gagcctctgccgcccatgtccaattactgcctgctggctgagaactcctacataaagatg
gaaattgacatccagggaaacctgcaggatggcagtcaggttgtggtatctgttatattt
gaaaacaagtgtgacaacttcctcaaaaccatggagttcaacgtcctggactctctcaac
tccaagctgcagaggccagaggggtcgggtccacatgatggcctcagcgtccccttccag
cttccacctggggtgtccaatgaggcgcgatttgtcttcaccatgcagagcatcgtaatg
ccacagaaactgaaggggaccctcaccttcatcataaagaatgaggactcctccactcac
gagaaactggacttcaaactgcactttacctgctcatcctacctaatcactactccttgc
tacagtgatgcgtttgcaaagctgcttgagtcgggtgacctgaagtgcagctctgtcaga
ctggagggagtcaacatgcccttccaccacctactggccaggatctgcttccaccaccat
ttctctgttgtggagaggatcgactcctgtgcctccatgtacagcaggtccatccagggc
caccacgtctgtctactggtcaaaacttctggtcagacagtgtccattgacgctaaatgt
gacgagccgacgctgcttgggaatgtgctggatgagatcaagcagaccttctctcagtgc
tga
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integrated database retrieval system
