Cyclopterus lumpus (lumpfish): 117729397
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Entry
117729397 CDS
T09199
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117729397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117729397
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117729397
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117729397
NCBI-ProteinID:
XP_034386299
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All DBs
Position
4:16376390..16380633
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AA seq
445 aa
AA seq
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MLNCSRPDTPSLLEALQPVFNLSSIRPVMNLSTPTNVSIDFTIYSILGVDEKTHVLKTYI
WQILKWRNEFVKWDPEQCGSSQITIPRKLLWVPDMVINEFMEKNSAPFVPYSYLFSDGLV
IDYQPVKVISSCKLDIYKFPFDIQNCSLSFNSYLHRQTALQIDLSSTVADILKYSKEVMT
TMGEWELVGLTVNTYLPPAGNEDVYEEMRFFVSVKRRATLYVVNLLIPSCFLVMVDLFSF
LLPPQNVDRSLFKMTLILGYTVFLLIMNDLLPASGNTVPLISVFLCLCLALMVASLLETI
LITNLLYGSAHYPPVPCWFRVFVLHILGRLVWLPPKPRDQQNTVIRNPAAQEMKVSSLAA
GDSEVSQQKGPLDKEKAWKELRHLESDLQAIRLQVKHRLGEGQGSEEWIQVGSIIDRLLL
SLYIIFISVSFITITTIWMQSYNTS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctgaactgctctcgacctgacacgccttccttgctggaggctctccaaccggtcttc
aacctcagctccattcggcctgtcatgaatctatcaacacccaccaacgtcagcattgac
ttcaccatttatagcattttgggagtggatgaaaagacccatgtcctcaaaacatatata
tggcaaatattaaaatggaggaatgagtttgtcaagtgggacccagaacaatgcggttct
tcacagattacaattccaaggaaactgctctgggtaccagatatggtcataaatgaattt
atggagaagaactcagctccatttgtcccatacagttatctgttttctgacggcttggtg
attgattatcagcctgtcaaagtgatcagctcctgcaagctcgacatctacaagtttcca
tttgatatccagaactgcagtttaagcttcaactcctacttacaccgccaaactgctctt
cagatagacctctcatcaactgtagcggatatattaaaatactctaaagaagtgatgaca
actatgggtgagtgggaactagttggactcacagtgaatacatacctaccaccagccgga
aatgaagacgtgtacgaagagatgcgcttctttgtgtcagtaaagcgccgggccaccctc
tatgtggtgaacctgctgatccccagctgcttcctcgtcatggtggacctcttcagcttc
ctgctgcctccccagaatgtggaccggtccttgttcaagatgacactgatcctgggctac
accgtcttcctgctcatcatgaacgacctgctgcctgccagtgggaacaccgtacctctc
ataagtgtgttcctgtgtctgtgcctggctctgatggtggctagtctactggagaccatc
ctcatcacaaacctgctgtatggctccgctcactatcctccagtcccttgttggttcaga
gtgtttgttcttcacatcctgggccgcctggtatggcttcctcctaagcccagagatcaa
cagaacacagtcatccgaaatcctgccgcacaagaaatgaaggtctcttctctggcggca
ggggacagcgaggtttcacaacagaaaggaccgctggataaggagaaggcctggaaggag
ctgaggcacctagaaagcgacctccaggccatccgccttcaggtgaagcatcggctcgga
gaaggccagggctcagaggagtggatccaggtgggttctatcatagaccgcctgctgtta
agcctctacattatcttcatatcagtcagcttcattaccatcaccactatatggatgcag
tcatacaacacatcctga
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