Cyclopterus lumpus (lumpfish): 117729424 Help Entry 117729424         CDS       T09199                                  Symbol ncanb Name (RefSeq) neurocan core protein   KO K06794   neurocan core protein Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:clum00535]     117729424 (ncanb)    00536 Glycosaminoglycan binding proteins [BR:clum00536]     117729424 (ncanb)    04091 Lectins [BR:clum04091]     117729424 (ncanb) Proteoglycans [BR:clum00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    117729424 (ncanb) Glycosaminoglycan binding proteins [BR:clum00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    117729424 (ncanb) Lectins [BR:clum04091]  C-Type lectins   Group 1: Proteoglycan core proteins    117729424 (ncanb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C EGF V-set Sushi hEGF Ig_3 EGF_2 ig Chordopox_A33R I-set EGF_CA Motif Other DBs NCBI-GeneID:  117729424 NCBI-ProteinID:  XP_034386334 LinkDB All DBs Position 4:23298313..23377841 Genome browser AA seq 1324 aa AA seqDB search MALTAFSSPLHLSGASNVDAVVNMRKVTHQTISEELSKTVLLPCLFTLRPSAGSSHEPPR IKWTKVWGQRGSDGQQKEQSVLVAKDNVVKVKKAFQGRVTLPGYNGNRYNASLALSGLRS SDSGLYRCEVVVGISDEQDTVPLEVTGVVFHYRAPHDRYALSFADAKRVCVENSAVIATP GQLQATFADGYDNCDAGWLSDQTVRYPIQSPRPGCYGDREDSPGVRNYGDRSPDELFDVY CFAKQLQGEVFHSSMPEKLSLATASTHCHSLGAQLANVGQLYLAWQAGLDQCDPGWLADG SARYPINVPRKNCGGDEPGVRTVYNNANRTGSPDTEDLYDAFCYRALQPAGVQAAEARAL YQAPDPAAEPVSSVTEARLRGEPFPKTSNWTGINNSSEIPEEHVVVHLGPEEGRGGKREE SDGTPTSDAVGLADLESHGGSAHEEEDGGYFGSSPTLSTTASSTPQSQTSNSVLAEFVNT LMKPFRYWRGGGEVEETNKGPSLAEETAGENQTHGEASGGNLSLPKPSGNKGSVDNAIME HRSGSSSFRTSTSGPQNPEEGLSEREKEVTPLIRLVPAVQSPGQNDTHSQPGEPSSSTSA HHPPSNGTSSTSTGFTETSPPGEHVDVSGPQGTGPASASPPAPAPGSRFRWAIKSMGGGS NLGPRGNVAYVGERPTWGPMEAKAGPLEVMTLPTALRQDNPENYSGQGKDQEGEDANSPS DARTASGEEKETEGSSDGSNFPGGFGVNAESSPGTKSSLGQSQTELVTVAEHTTLSRWQL VRQPTTPPRGSLEPDTAEEARGEILYVHRPTGDLPSAPSQRGESSSGFTPHFKKHSEDTS RKEAATSTPGALMEAATTSEVTAAELLTTGDPQRTDPVTTATATEISSAGATTEEPSISI SWVREERGKTTPDLSATAAPSDGSQTVAVQPTAFASGSNVGATEMESRSAVSESFVVGSR WTPFKTASVSPKSDEHKAPVSKDGKDASNPFGILVPNWAFGLAPSVESDPCHTNPCLHGG SCLQEGDGYSCYCPQGFSGESCEIDIDDCQSNPCQNGGTCIDEINSFVCLCLPSYGGATC EKDTEGCEHTWRKFHGHCYRYFSRRHTWEDAEKDCREHSGHLASIHSLAEQNFIRGLSHD NTWIGLNDRTVEDDFQWTDKMDLQYENWRENQPDNFFAGGEDCVVMIAHENGKWNDVPCN YNLPYVCKKGTVLCGAPPTVDNAFLIGRKRSHYDIHSVARYQCADGFLQRHVPTAKCRAN GKWDRPKIICIKSRRAHRYRRHHHKGRRERRKHMRQHGHRGGGRHGGELGHGHAHNRNHG HVHV NT seq 3975 nt NT seq  +upstreamnt  +downstreamnt atggcattgactgcgttctcctctcctctccacctctcaggcgcatccaacgtcgacgcc gtggtcaatatgcggaaggtgacccatcagaccattagcgaggagctgtccaaaaccgtt ctcctcccctgcctcttcaccctccgccccagtgccggttcctcccacgagccccccagg atcaagtggaccaaggtttggggccagagaggctccgacggacagcagaaggagcagtcg gtcctggtggccaaagacaacgtggtcaaggtgaagaaggccttccagggtcgtgtgacg ctgcctggttacaatggcaaccgctacaacgccagtcttgctttgtcagggctacgttcg agcgactctggtctgtaccgctgtgaggtcgtggtgggcatcagtgacgagcaggacaca gttcccctggaggtcacaggtgtggtgtttcactaccgggccccacacgaccgctacgcc ctgtccttcgccgacgccaagagggtgtgtgtggagaactcggccgtcatcgcgacgccg ggccagctgcaggccaccttcgccgacggatacgacaactgtgacgccggctggctgtct gaccagactgtgcggtatcccatccagtcgcctcggcccggttgctatggcgatcgggag gactcacctggagtccgtaactacggcgataggtcccccgacgagctgtttgacgtctac tgcttcgccaagcagcttcaaggggaagtcttccactcctcgatgccggagaagttgagc ctggccacggcctccacccactgccattccctgggagcccagctggccaacgtcgggcag ctctacctcgcctggcaggccggcctggaccagtgcgaccccggctggctcgccgacggc agcgcccgctaccccatcaacgtgccgcggaagaactgcggcggagacgagcccggggtg cggaccgtctacaacaacgccaaccgcaccggttcccccgacaccgaggacctgtacgac gccttctgctaccgagccctccagccggcaggcgtccaggctgcggaggcacgggctttg taccaggcccccgaccccgcggcagagcctgtctcctcggtgaccgaagcccggcttcgc ggtgaaccttttcccaagacctccaactggaccggaatcaacaactcctccgagatcccc gaagagcacgtcgtcgtccacctcgggccggaggagggccggggggggaaacgggaggag tctgacggcacgccgacgagcgacgccgtgggcctcgccgacctggagagccacggaggc tcggctcatgaggaagaagacggcggctattttggatcgtccccgacgttatcaaccacg gcctcttcgactccccagtctcagacgagtaacagcgtgttggctgagtttgttaacact ctgatgaagcccttcaggtactggagagggggtggggaggtggaggagacgaacaagggc ccgtcgttggctgaggaaacagccggggagaaccagacgcacggagaagcatccggcggg aacctgagtttaccgaaaccgagtgggaacaagggcagcgtggacaatgccatcatggag cacaggagtggtagttcctccttcaggacttctaccagcggaccacagaacccagaggaa ggtctgtccgagcgggagaaagaggtgacgcctctgattcgattggtgcctgcagtccaa agcccggggcaaaacgacacccactctcagccaggagaaccatcctccagcacgtctgcc caccatccgccgtccaacggtacgagctcaacctccactggattcaccgagacgtcaccg cccggtgaacacgtcgacgtgtccggtcctcagggtacaggcccggcttcggcttcgcct ccggctcccgcccccggcagccgctttcggtgggccatcaaatccatgggcggaggctct aacctaggcccccgtggaaacgtggcctacgtgggcgaacgccccacctgggggcccatg gaagccaaagcggggcccctcgaggtgatgaccttgcccaccgcccttcgacaggacaac ccggaaaactattcaggccaggggaaggaccaggagggagaggacgccaactctccgtcg gacgccagaacggcatcgggggaggagaaggagacggaggggagcagcgatgggagcaac ttccctggcgggtttggagtgaacgcagaaagcagtcctggaactaagtcttcgctcggc caaagccagactgagcttgtgactgtggcagagcacacgactctgtcccggtggcagcta gtgcgacagcccaccaccccacctcggggctccctggagccggacacagcagaggaagcc cggggagagatcctctacgtccacaggccaaccggcgacctcccctcggctccctcacaa agaggggaaagtagttcaggtttcactcctcattttaagaagcacagcgaagacaccagc aggaaggaggcggccacttccacacccggagcccttatggaggcggcgacgacctccgaa gtgaccgcggcggagctcctgacaaccggagacccgcagaggacggatcccgtcaccaca gcgaccgccacggaaatctcctcggcgggcgccaccaccgaggagccgtctatttccatt tcatgggttcgggaagagagggggaaaacaacgcccgacctctcagctactgcggcaccc agcgacggatctcaaaccgtcgcggttcagccgaccgctttcgcgtcgggctccaacgtc ggcgccacagaaatggaatccaggtccgcggtgtcggagtccttcgtggtcgggagccgg tggacgcctttcaaaaccgccagcgtcagcccaaagtccgacgagcacaaagctccggtg tcgaaggacggcaaagatgcgagcaaccctttcgggatcctcgtacccaactgggccttc gggctcgccccatcagtggagagcgacccgtgccacaccaacccctgtctccacggaggg agctgcctgcaggaaggtgacggctatagctgctactgtcctcagggcttctctggagag agctgcgagatcgacatcgacgactgccagtctaatccatgccagaatggaggaacctgc atcgacgagatcaactcctttgtgtgtctttgtctgcccagttacggaggagccacctgc gagaaagacacggagggctgcgagcacacgtggaggaagttccacggccactgctacagg tacttcagccggagacacacctgggaggacgccgagaaggactgccgggagcacagcggc cacctggccagcatccacagcctggccgagcagaacttcatcagaggtctgagccatgac aacacgtggatcgggttaaacgatcgtacggtggaggacgactttcagtggaccgacaag atggacctgcaatatgagaactggcgtgaaaaccagccggacaatttctttgccggagga gaagactgcgtggtcatgatcgctcacgagaacggcaaatggaacgacgtgccctgcaac tacaatctgccctacgtctgcaagaagggaacagtgctttgcggagccccgcccaccgtg gacaacgccttcctgattggtcggaagcgctcccactacgacatccactctgtggctcgc taccagtgcgccgacggcttcctgcaacgccacgtgcccactgccaagtgtcgcgccaac ggcaagtgggaccggcctaaaatcatctgcataaaatcccgacgagcccaccgctaccgg cgccaccaccacaagggcaggagggagcgcaggaagcacatgaggcagcacggccacaga gggggcgggcgccacggaggagagctgggccacggccacgcccacaaccgcaaccacggc cacgtccacgtctga

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