Cyclopterus lumpus (lumpfish): 117729492
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Entry
117729492 CDS
T09199
Symbol
cilp2
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117729492 (cilp2)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117729492 (cilp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
TSP1_spondin
Ig_2
I-set
CarbopepD_reg_2
TSP1_ADAMTS
TSP1_CFP_C
ig
Ig_5
Motif
Other DBs
NCBI-GeneID:
117729492
NCBI-ProteinID:
XP_034386498
Ensembl:
ENSCLMG00005000493
LinkDB
All DBs
Position
4:complement(23039782..23058446)
Genome browser
AA seq
1250 aa
AA seq
DB search
MLELNKVALLLSVLASVALGQGLVRTRSPSDRSRRVALNTFADAQTTGVTEWTSWFNIDH
PGGNGDYERLEAIRFYYRERVCARPTAMEARTTDWVAPADTGEVVHSSLEKGFWCVNNEQ
PRGRVCSNYHVRFQCPPVQSYWTNWSEWGPCSTAVCNDVGIQVRQRKCVNTQPMPLLLVP
ACIGHHSERRECSNPPCTAKWGPWGRWGTCSATCGGGRRIRRRTCARSSETVQCTGRPAE
IQKCGRSPCPDKCQLVCSEGRPSEDCSRCACDDHVLHGEVHGVTGVPVAEAWVALDREPK
VIRALTDAKGQFRITGICSASSGAISIRKEKFAPITVSAANNGTGLSWVRAVLRSAEKPY
VVKHPEDKVRYEGGRVMMCCKATGSPPPDKYYWYHNGTLLDRKLYKYEEDLVLWSLKPEQ
SGQYYCKTSSSAGSIKSSPALLTVIAKGQPSCNSTPEMHLIRLPMDCVQPGTDSMHYNTG
RCLHNKCAGSLDFDMRCRDEAGFCCGVKDMESRVINCGSYILPIRAVTQCSCQKCLQPTV
LVRGRVVTADNGEPLRFGHIYIGKERAGTTGYQGGFTLQIPPDTQRLVVNFVDPTEKFLD
TPKVFILDKRGGSIYHDVKVMRKKAPIDINAGETNSINLGEINGEDPIGQLVIPPNSFHK
ENGEIYEGTVKASVTFIDPRNITTAAAAPGDLNFVDGEGDMLPLRTYGMFSVDFRDESNK
EVLGAGAVQVLLDTQHVKMPEHIPKMKLWSLNPDTGVWEEESDFSYTTTTAGGHGRSKRE
ERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLSSEQLEGVVITLINLEPKPG
FSSNPRAWGRFDSVITGSNGACLPAFCDAQRPDAYTAYVTAMMGGEELEAAPSSPKMNPN
IIGVSQPYLDKIDYQRSDHDDPALKKTAFKINLAKPNQNNFDETNGPIYPYQNALSCENA
PIDANHFRFFRVEKDKYEYNVIPFEENDLTTWMGDYLSWWPNPQEFRACFIKVKIHGQKE
VMVRSRNLGGTHRETKGKLYGLRDIRSTRDMREANTSAACLEFKCSGMLFDQAEVDRSII
SVLPQGNCRKTNTNSLLQEYLIKHPPVAPNNDTHGFTMLAPVDPLGHNYGIYTVTDQNPR
VAKEIAIGRCFDGTSDGFSREMKTDSGVALTFSCPERKINRESLFQRLQNNPSQTLAQMG
RSMRESEGMQAQRLPTRIVAYPSEQQGRTQNRRVTSTTRRRVSMRTQQRQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattaaataaggtggcgctcctgctgtctgtgctggcttcagtggctctgggc
caaggacttgtgaggaccaggagcccgtcggaccggagcaggagagtcgccctcaacacc
ttcgctgacgcacagacaacaggcgtgacggagtggacgtcttggttcaacatcgaccac
cccggagggaacggagactacgagcgcctggaggccatccgcttctattaccgggagagg
gtctgcgctcggcccaccgccatggaggctcgcaccacagactgggtggcaccggcagac
accggcgaggtggtccactccagtctggagaagggcttctggtgcgtcaacaacgagcag
ccccggggccgcgtctgttccaactaccacgtccgcttccagtgtcccccagtgcagagc
tactggactaattggagcgagtggggtccctgctccaccgcggtgtgtaacgacgtgggc
atccaggtccgccagaggaaatgtgtgaacactcagcccatgcctctgctgctggtgccg
gcgtgcatcgggcaccactcggaaaggagggagtgctccaacccgccgtgtaccgccaag
tggggcccgtggggtcggtgggggacgtgttcggcgacctgtggtggtggtcgcaggatt
aggaggaggacctgcgcgaggagctcggagaccgttcagtgcaccgggcggcctgctgaa
atacagaagtgtgggaggagtccatgcccagacaaatgtcagctcgtgtgcagcgagggc
cgccccagcgaggactgcagccggtgcgcgtgcgacgaccacgtgctgcacggcgaagtc
cacggtgtgaccggcgtgcccgtggccgaagcctgggtggccctggacagagagcccaag
gtgatccgcgcccttacagatgccaaaggtcagttcaggatcacgggaatctgctccgcc
agctccggcgcgatctccatcaggaaggagaagttcgccccgatcaccgtctccgccgcc
aacaacggcaccgggttgtcatgggtacgggctgtcctcagatcagccgagaagccgtac
gttgtcaaacacccggaggacaaagtgcgttacgagggaggacgggtgatgatgtgctgc
aaggcaacggggtcaccgccgcctgacaaatactactggtaccacaatgggactcttctg
gacaggaagctgtacaaatatgaagaggaccttgtcctgtggagcctgaagccggagcag
tccgggcagtactactgcaagaccagcagctctgcgggcagcatcaagtcctctccagcc
ctcctcactgtaatcgcaaaaggacagccatcgtgcaactccacccccgagatgcacctc
atcagactgccgatggactgcgttcaacccgggactgactccatgcactacaacactggc
cgctgccttcacaacaaatgcgctggctccctagactttgatatgcgctgcagagacgaa
gccgggttctgctgcggggtcaaagacatggaaagtcgagtcatcaactgtgggagctac
atcctcccgatccgggctgtgactcagtgcagctgtcagaagtgtttgcagcccactgtg
ctggttcgtggcagagtggtcacggctgacaatggtgagccgctgcgttttgggcacatc
tacattggtaaagagagggcgggcaccaccggataccaaggagggttcacgttgcaaatt
cctcccgatacgcagagattagtggtcaattttgttgaccccactgagaagtttcttgac
actcccaaagtgttcatcctcgataagagaggtgggtccatctaccacgatgtgaaggtg
atgagaaagaaggcaccaattgacatcaatgccggagagaccaactctattaacctcggg
gaaattaatggcgaagaccccattggtcagttggtgattcctcccaactccttccacaag
gagaatggagaaatctacgagggaactgtgaaagcgagcgtcacattcattgacccgaga
aatatcaccacggcggccgcagcacctggcgatctcaactttgtggacggtgagggcgac
atgctccctttgaggacctatggcatgttctctgtggacttcagagatgagtccaacaag
gaggtactcggagctggagctgttcaagttctcctagacacgcagcacgtcaaaatgccg
gagcacattcccaaaatgaaactgtggtctctaaacccggacacaggagtctgggaagag
gagagcgacttctcctacaccacgacaactgccggcggtcatggacggagcaaacgagag
gaacgcacattcctcataggcaacatggagatcagagaacgtaggctcttcaatctggac
gtgcctgaaaacagacgctgctacgtcaaagtccgtgcctacatgagcgacaagttccta
tctagtgaacagctggagggcgtagtgatcaccttgataaatttggaacctaaacctgga
ttttcctccaaccctagggcatggggccgcttcgacagcgtgataactggatccaacggg
gcctgtttaccggctttctgtgatgcccaaaggcccgatgcttacacagcttatgtcaca
gcaatgatgggtggggaagaactggaggcagctccctcctcccccaagatgaatccaaac
atcattggcgtgtcccagccatacctggataaaatagactaccagcgctcagaccacgac
gatccggctctgaagaaaacggccttcaaaatcaacttggcgaagccgaaccaaaataat
tttgatgagacgaatgggccaatatatccgtatcagaatgcattaagttgtgaaaatgcc
cctattgatgcgaatcatttcagattcttcagagtggaaaaggacaagtatgaatacaat
gttattcccttcgaggagaacgatttgacgacctggatgggagactacctctcctggtgg
cccaacccccaggagttcagagcatgcttcatcaaggtcaagatccatggacagaaggaa
gtgatggtcaggtcgaggaatctcgggggaacacaccgagaaacgaaaggcaaactttat
ggcttaagagacatccgcagcacccgggacatgcgagaagccaacacctcagcggcctgt
ttggagttcaaatgcagcggcatgttgtttgatcaagctgaggtggaccgatccatcatc
tcagtgcttccacaggggaattgtcgcaaaaccaacaccaacagcctcctccaggagtac
ctcatcaaacatccaccggtcgctccaaacaacgacacccatgggttcaccatgctggca
cccgtcgatcctttgggacacaactatggcatctacacagtcacagaccagaaccccagg
gtggccaaggagattgctattggccgctgctttgacggcacctcggatggtttctccagg
gagatgaagacagactctggagtggcgctgaccttcagctgtccagagaggaaaattaac
agagaaagccttttccaacgcctgcagaacaacccgtctcagactctggcccagatgggg
aggagcatgagggagtcggagggtatgcaggcgcagagattacccacccggatagtggcc
tatccttcagagcagcagggcaggacccagaatcgcagagtcacctctacaaccagaaga
agagtgtccatgcgcacacagcagcggcaatag
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integrated database retrieval system
