Cyclopterus lumpus (lumpfish): 117729529
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Entry
117729529 CDS
T09199
Symbol
ttc39a
Name
(RefSeq) tetratricopeptide repeat protein 39A isoform X1
KO
K24943
tetratricopeptide repeat protein 39
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117729529 (ttc39a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
117729529 (ttc39a)
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Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_16
TPR_12
TPR_8
TPR_1
SFXNs
Motif
Other DBs
NCBI-GeneID:
117729529
NCBI-ProteinID:
XP_034386570
Ensembl:
ENSCLMG00005006931
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All DBs
Position
4:19430579..19453035
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AA seq
618 aa
AA seq
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MSFITNFRRTVKKNDGKTDASKAQDILDSPGAPNQLSVINSPEMDPIITDFRLQLSDNKD
APQSTNPSNGCSRSDLSLALEDCMAALDLFLRNEFEEAQSRLRSRTKDSMYHALTYATIL
EMQAMMTFDPQHILTAGNTMKDAQAICQRYRKKSSFSKNFTEEEIHAEVCYAECLLQRAA
LTFLQDENMISFIKGGIKVRNSYQTYKELHTILQSPGYSQGDNHCHFEGGVKLGVGAFNL
MISMLPTRTLKLLEFVGFTGNKEFGLQQLLEGSAESTFRSFLCNMLLLCYHTFMSFILGT
GEGDVEDAEKLLQPYLEKYPTGSIFLFFAGRIEEIKGNLDAAIKRFEECCEVQQQWKQFH
HMCYWELMWCFTYKRHWKMAYFYADLLSKENTWSKATYAYMKAAYLSMLTPDDCLTFGET
ALTLFRQVPGLKQKIAGKSLPTEKFAIRKARRYLAENPIALPAPPLEMMYIWNGYTVIGK
HKDLTEGMLKTLGEAQAKLDSTPRSEFTVDDQCLLSLLKGLCLKHLGRQEEAEQYFTLVL
CNESQIKYDHYLVPNALLEHGLLCLEQGRNAEAISLLETAMQNYKHYSMESRTHFRIQAA
LQKAKGVGENGIHSPSSP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagttttattaccaactttagacgtaccgtgaagaaaaatgacggcaaaacggatgcc
agcaaggcacaggacatcctcgacagcccgggggccccaaaccagttgtccgtcataaac
agtccagaaatggatcccatcatcacagacttcaggttacagctttcggacaacaaagat
gctccgcaatcaacaaatccatcaaatgggtgctcgcgatcagacctgtcgctggctctg
gaggactgcatggccgccctggatctgttcctcagaaacgagtttgaggaggcgcagtct
cggcttagatccagaaccaaagacagcatgtatcacgctctgacctatgccaccatcctg
gagatgcaggccatgatgacctttgacccccaacacatcctgactgcgggaaacaccatg
aaagatgcccaggccatctgtcagcggtaccgcaagaagtcgagcttctccaagaacttc
acagaagaggagattcatgctgaggtttgctacgctgagtgtctcctgcagagggcagca
ctcaccttccttcaggatgaaaacatgatcagtttcatcaaagggggaatcaaagtcagg
aacagctaccagacatacaaagagcttcacacgatcctccagtctcctggatactctcag
ggggacaaccactgccattttgagggtggtgttaaactgggagtcggagcctttaatcta
atgatttccatgttgcccacgcggacgctcaagctgctggagtttgtcggcttcactggt
aataaggagttcggtcttcagcagcttctggagggctccgcagaaagcacattcaggtcc
tttctttgcaacatgctgctgctctgctatcacaccttcatgagcttcatactcggcact
ggagaaggagacgttgaagatgcagagaaactgttgcagccatatctcgaaaaatatccc
acgggatccatcttcttgttcttcgctggtcgaatagaagagatcaaaggaaacttggat
gctgctatcaagcgttttgaggagtgctgcgaggtccagcagcagtggaagcagttccac
cacatgtgttactgggagctgatgtggtgcttcacatacaagaggcactggaagatggcc
tacttctacgctgacctgctcagcaaggagaacacttggtccaaggctacttatgcgtat
atgaaagcagcatacctcagcatgctgactccggatgactgcctcaccttcggggagact
gcgctcactctgttcaggcaggtcccagggctgaagcagaagatagcggggaaatcttta
ccaactgagaagtttgctatcaggaaagcccgtcgctaccttgcagaaaacccaattgct
cttcccgctcctccactggagatgatgtacatctggaacggctacacagtcattgggaaa
cacaaagacctgaccgaaggcatgctgaaaacactgggcgaggcgcaagctaaactggac
agcaccccaaggtctgagttcaccgtagacgaccagtgtctgctgagcctcttgaaggga
ctgtgtctcaaacacctggggcgtcaagaggaagccgaacaatactttacccttgtgctc
tgcaatgagtctcagatcaagtacgaccactacctggttcctaatgctctgctggagcat
ggcctgctgtgtctggagcaaggcaggaacgctgaagctatcagcctcttagaaaccgca
atgcaaaattacaagcactactcaatggaatcccggacacacttccgtattcaagctgct
ctgcagaaggccaagggcgtgggggagaatggcatccattctccctccagcccttaa
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