Cyclopterus lumpus (lumpfish): 117729532
Help
Entry
117729532 CDS
T09199
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117729532 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117729532 (taf4b)
03036 Chromosome and associated proteins [BR:
clum03036
]
117729532 (taf4b)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117729532 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
117729532 (taf4b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117729532 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
117729532
NCBI-ProteinID:
XP_034386588
LinkDB
All DBs
Position
4:3895699..3906508
Genome browser
AA seq
704 aa
AA seq
DB search
MATNKVVLEVQKLESCGAARSGDNAIQVKILQVPAKCATTAAVQPPPTAAGVSKSVAVSA
PPKVIPIGHLHHPTSSTVTVPGRQTSSFMVVAKVSTPGGVGQPQGTKPALSQVASMNQAT
TPGRTVVITVPRAAGPQTVTMPSRLPQTASPQLPANIQIPPGMMLIRSDSGQLMLVSQQA
LAQAQQAPRGISGQAPKLLVPQVFLSAVNKTNEKVTVIRMAAPPSFHPAPIQKTTVVKVI
GVTPKPAVVQTLSAVSERGSQLRFQAVATETKKETPTTVDQATLDSVKKCKNFLVTLIKL
ASSDSRSANMANNVRGLVRSLLEGKLEAEEFTEQLYHELKSTPQPCLVPFLKKSLPAVRR
LTADPQLFIQQASTSTGNLVKQSSTVTGPLLSTSQQVIQQPSAVTLRAGTTTLVQSRNYI
LKSSRPVPKHTVVQSGKPFAGMLSLKQPFTREPPLSTTFAFKDSSGSYREDDDINDVASM
AGVNLREENAQILTTVVGSVVQSCQDQPFLSPKPVLGQILRIGKALGVTDVGPEVVNLVS
HATQECLRGLLEKLTVVADHRKAALKEDLWHAKVTDVRSQLRFLEEVESLKKKRIDEEER
ERLLRLARSRSHTEDPQHQQLKQRAKELQQMEEAQLQQREANLTALAAIGPRKKRPLEQT
ESQVTLLPRQSIQRVTRVMLRDLLVCMEQDRFLCHSLPLYRAML
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaataaagttgttcttgaagttcagaagctggagtcctgtggggcagcacgg
agtggagacaacgctattcaagtcaagatattacaggtcccggccaaatgtgcaaccacc
gctgctgtgcaacctccacccactgctgcaggcgtctcaaagagtgtggctgtctctgcc
ccacctaaagtcattccaataggccatctccaccatcccacctcctctacagttacagtc
ccagggcgtcagacttcctctttcatggtggtagcaaaggtgtccaccccaggaggagtg
ggccaaccacagggcacaaaaccagccttgagccaggtggcctccatgaaccaggccaca
accccaggaaggacagtggtgataaccgtaccaagggcagcgggtccacagacagtcacc
atgccctcccggcttccacagactgcctccccacagctcccagccaatatccagatacca
ccaggtatgatgttgatccgcagtgacagtggtcagctgatgctcgtatcccagcaggct
ttggcacaggctcagcaggcaccaagaggtatcagtggtcaagcacctaaactactggtc
ccacaggtatttctatctgcagtaaataaaaccaatgagaaggtgaccgtgatcaggatg
gccgcccctcccagtttccacccagcaccaatccagaagaccactgtggtaaaggtgatc
ggtgtgactcccaaaccagctgtagtccagaccctcagcgctgtgtctgaacggggaagc
cagcttcgctttcaggcggtcgccacggaaaccaaaaaggagacaccaaccacggttgat
caggcgaccctggatagtgtgaagaagtgcaagaacttcctggtgactcttatcaagctg
gcctccagtgactccaggtctgccaacatggcgaacaacgtcagaggactggtcaggagt
ctgctggaagggaagctagaagcagaggagtttacagaacagctgtatcatgagttgaag
tccactcctcagccctgcttggtgcctttcctcaagaaaagtcttcctgcagtgcgtcgc
ctcaccgcagacccccagttattcatccaacaggcttccacttctacgggcaaccttgtg
aagcagtccagcaccgtcacaggacctctcctcagtaccagccagcaggttatccagcag
ccgtcagcagtgactctgagagcgggtacgacgacattagtgcagtccagaaattacata
ttgaagagcagcagacccgtccccaaacacacagtggtccagtcgggaaaaccctttgca
ggaatgttgtcattgaagcagcctttcactcgggagccacctctttctacaacgtttgca
ttcaaggacagttcaggatcatacagagaggatgatgacattaacgatgtggcctccatg
gctggggtcaacctgagagaggaaaatgcacagatcttgaccacggtggtcggctctgtg
gtgcagtcgtgccaggatcagcccttcctctcaccaaagccagtgctcggacaaatcctc
cgtataggaaaggcattgggagtgacggacgtcggtccagaggtggtgaatctggtgtct
catgccactcaggagtgtctccgtgggctgctggagaagctcactgttgtggcggaccac
cgcaaggcagccctgaaggaggacctgtggcatgccaaagtgactgatgtgcgatcccag
cttcgcttcctggaggaagtggagagtttgaagaagaagagaattgatgaagaggagaga
gagagactgctgcgtttggccagaagtcgctcacacactgaggatccacagcatcagcag
ctcaagcaacgagccaaagagttacaacagatggaagaagcccagctgcagcaaagagag
gccaacctcacggctctggctgccatcgggcctcgcaagaagagacctctggagcagacg
gagagccaggtgaccctgctgcccagacagagcattcagagggtgacccgggtcatgctg
agggatctgctggtgtgtatggagcaggaccgcttcctgtgccactccctccctctgtac
agagccatgctctga
DBGET
integrated database retrieval system
