Cyclopterus lumpus (lumpfish): 117729534
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Entry
117729534 CDS
T09199
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117729534 (chd1l)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117729534 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
AAA_22
SWI2_SNF2
LBD_receptor
Motif
Other DBs
NCBI-GeneID:
117729534
NCBI-ProteinID:
XP_034386599
Ensembl:
ENSCLMG00005000276
UniProt:
A0A8C2WEP3
LinkDB
All DBs
Position
4:complement(26573648..26597401)
Genome browser
AA seq
1018 aa
AA seq
DB search
MADFLFTRRGAEKHKTPLTQSDLVQCGLKGIQLRPYQLHGVQWLTQCLQHQQGCILGDEM
GLGKTCQTISLLVFMSGSLGSKGPFLVLSPLSVMENWRAELERFAPSLTALRYHGDKERR
AELQRETHTRDFDVLLTTYELCLKDASFLRRWKWEVLVVDEAHRLKNQNSLLHKTLTQFS
VGFRVLLTGTPIQNNLQELYSLLSFIQPDVFTAEKADDFTDSYREVQSRPALAAELQRVL
DPFLLRRVKSEVAVDLPKKTELLMYHGMSALQKKSYKAFLMKDLEAFQGNKNKLLNILMN
LRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLCLLDSMLAYLHKGGHRILLFSQMTRMLD
ILQDYMEFRGYSYERLDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTAADTVI
FMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMFSRAASKLQLTDTVIEEG
RFSLLDRAQSAAAGLKLSEILKFGVDKLLSSSESSVTDVKLEKILGSSQDGHWVEDDCSS
LREEEEEEGEEEEGEEEESVSESDGQNHMYYFEGRDYSRDPSAGDQKTFDRLLEEQLAEF
QRDAGGRRALRHNAGVSPSVALGMPTRKRKPLTEAELELRSQRREEAAVKRAKLQEDTKK
KQQEQKHKKKMAWWESCGYRSRCLPPADSEEEEEEDEEDDSSVCSTDSDSSAIHYVLGDV
THPHAAQGDAIIVHCVDDSGRWGRGGLFTALELRSDEPRHKYELAGKMKDLDVGNVLLLP
IDDKQSRLDGRDQLALIVAQRRDEANKLSGILLSALDDGLKKIHAAAKRHKASVHLPRIG
HATRGFNWYGTERLIRKHLASRGVATFVYYHNRAAKNSAPPPLTPTSSSAPPPLSPTSSS
APPPLSPTSSSNAPTEDEAPPPSQLPSFMGGVRVFFFNLAASDRKRLGRYLVTYDGDEDD
VMSPEVTHVVAEVESSVQSQELRALLARFPRAVPVPPAWLESCFSRQRTVGAAPFLLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttcttgtttacacgccgcggcgcagagaagcacaagacgccgctgactcag
agcgacttggttcaatgtggattaaaagggatccagctgagaccttaccagctgcatggg
gtccagtggttgacccagtgtctgcagcaccagcaggggtgcattctgggagacgagatg
ggtttggggaaaacctgtcagacgatctctctgctggtcttcatgtcgggttctctgggg
agcaaaggtccgttcttggttctgagcccgctgtctgtcatggagaactggagggcggag
cttgagcgcttcgctccgtctctgaccgcgttgcgttaccatggagacaaagagaggcga
gccgagcttcagagggaaacgcacactcgggactttgatgttctgctcacgacgtacgag
ctgtgcctcaaagacgcttcattcctgagacggtggaagtgggaggtgctcgtcgtagac
gaagctcacaggctgaagaatcagaattcattgttgcacaagaccttgactcagttctca
gttgggttcagagtcctgctcacggggacccccatccagaacaacctgcaggagctctac
tccctgctgagcttcatccagcccgacgtcttcacggccgagaaggccgacgacttcacc
gactcctaccgcgaagttcagagtcgacccgctctcgctgccgagctgcagagggtcctg
gaccccttcctgctccgccgggtgaagtccgaagtggccgtggacctgccgaagaagacg
gagctgttgatgtaccacggcatgtcggccctgcagaagaagtcctacaaagccttcctg
atgaaggatctggaggctttccagggcaacaagaacaagctgctaaacatcctgatgaac
ctgaggaagtgtgtcgaccacccgtacctgtttgacggggtggagccggagccgtttgag
atgggggagcatctggtggaagccagtgggaagctctgccttctggacagcatgctggcc
tacctccacaaaggaggccatcggatcctgctgttctcccagatgacgaggatgctggac
attcttcaggattacatggagttcagaggatacagctatgagcgtctggacgggtccgtc
cgaggggaagaaagaaatctagcagtgaagaacttcagcagcaaagatatctttgtcttt
cttctgagcactaaagcagggggcgtcggcctgaacctcacagctgctgacaccgtcatc
ttcatggacagcgacttcaaccctcagaacgacctgcaggcggctgcacgctgccaccgg
attggtcagaacaggcccgtgaaggtgatccgcctcctggcccgagacaccgtggaggag
atcatgttctctcgagccgcgtccaagctgcagctcaccgacacggtgatcgaagaagga
cgcttctctctgctggaccgagcgcagtccgccgctgcgggactcaagctcagcgagatc
ctgaagttcggggtcgataagcttctgtcgtcgtcggagagctctgtgacggatgtgaag
ctggagaagatcctcggttcctcgcaggacggccactgggtggaggacgactgcagctcg
ctcagagaggaggaggaggaggagggggaggaagaagagggggaggaggaggagagcgtc
tctgaatccgacgggcagaaccacatgtactactttgagggaagagactacagtcgcgac
ccgagcgctggagaccagaagaccttcgaccgtctgctggaggagcagctggccgagttc
cagagagatgcaggaggacgacgagctctgaggcacaacgctggagtctctccgtcggtc
gccctcgggatgccaacgaggaagaggaaacctcttacggaggcggagctggagctcaga
agccagagacgggaggaggctgcagttaagagagccaaacttcaggaggatacgaagaag
aagcaacaagagcagaaacacaagaaaaaaatggcgtggtgggagtcgtgtggctacagg
tcacgttgtctgccgccggcggacagtgaagaagaggaagaagaggatgaggaggatgac
agcagcgtgtgctccacagactctgacagctcggccatccactacgtcctgggggatgtg
actcaccctcacgccgctcagggagacgccatcatcgtccactgtgttgacgactcgggc
cggtggggtcgaggaggcctgttcacggcgctggagttgaggtccgatgaaccgcggcac
aagtacgagttggccggcaagatgaaagatttggacgttggaaacgtgctgctcctcccc
atcgatgacaaacagtccagattagacggccgggatcaactggccttgatcgtcgcccag
cggagagacgaagccaacaagctgtccgggattcttctgagcgctctggacgacggcctg
aagaagatccacgccgcggccaaaagacacaaagcgagcgtccatcttcctcgcatcggc
cacgccacccgaggcttcaactggtacggcacggagcggctcatcaggaagcacctggcg
tccagaggcgtcgccacgttcgtttattaccacaacagagcggccaagaactcggctcct
cctcctttgaccccgacgtcctcctcggctcctcctcctttgtccccgacgtcctcctcg
gctcctcctcctttgtccccgacgtcctcctcgaacgcgccgactgaggacgaggctcct
cccccctcgcaactcccctccttcatgggaggagtccgtgtgttcttcttcaacctggcg
gcgtcggacaggaagcggctcggccgatacctcgtcacgtatgacggagacgaggacgac
gtcatgagtccggaggtcacgcacgtcgtggcggaggtggagagcagcgtccaatcacag
gagctccgggccctgctggctcggttcccccgggccgtcccggttcccccggcctggctg
gagtcctgcttctcccggcagaggacggtcggcgcggcgccgttcctgttgccgtga
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