KEGG   Cyclopterus lumpus (lumpfish): 117729557
Entry
117729557         CDS       T09199                                 
Name
(RefSeq) cadherin-2-like
  KO
K06736  cadherin 2, type 1, N-cadherin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117729557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117729557
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117729557
   04090 CD molecules [BR:clum04090]
    117729557
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    117729557
Cell adhesion molecules [BR:clum04515]
 Cadherins
  Major cadherins
   117729557
CD molecules [BR:clum04090]
 Proteins
  117729557
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_3 Stevor DUF2304 CD34_antigen DUF5385
Other DBs
NCBI-GeneID: 117729557
NCBI-ProteinID: XP_034386642
Ensembl: ENSCLMG00005020259
LinkDB
Position
4:3657708..3727390
AA seq 918 aa
MHLLGIWMLMAALQLVALGREAERSSSGEQGSLPCTRGFTQEDYVIEVDRELAKGQAVFN
VSFTDCGRRKVWFQVSDSSDFGVSEDGAVYALRRLSLVGSGKAVEVVYAQDPQSKQVWKT
RVHLLVRPNGNSAGLEQVKHSDATLTQRVPEILFPWRSVVVRGDGTLRRVKRDWVIPPIN
VPENSRGQFPEELVRIRSDRDNNRLLRYSVTGPGADQPPTSIFIISPISGQLSVTKPLDR
EHISNFHLRAHAVDLNGNQVENPIDIVINVIDQNDNRPEFTHTIFNGSVPEGSKPGSFVM
TVTSVDKDDPKTANGMLRYKILSQNPQSPSSNMFTINNKTGDIITVAAGLDREKVTQYTL
IIQATDMEGNPTYGLSNTATTVIRITDVNDNPPEFTTDTFFGEVHENRVNVIVANLTVTD
KDQPHTSAWSAVYRIIAGDPTGRFSIPTDHTTNEGLLTVVKPIDFELTRSFMLTVEAENE
VPLARGIHLPRQSTATVSVRILDVNESPEFSPNPKSIKLEEGLPAGSLLTTFTAQDPDRF
LRQTVRYSKMYDPANWLEIDPVNGRISTIAILDRESPYVKNNLYNVTFMASDNGIPPASG
TGTLQMYLLDINDNAPHVFPPEVEMCEKPDPNAINITASDPDLTPNAGPFAFELANRPSD
VRRNWTLNRINGEYAQLRLRIGSLASGIYEVPIMITDSGNLPMSNTSYLRVKVCQCDHHG
DCVDMERIIAAGLGTGTIIAILICIIILLVLVLLFVMWMKRRDKERQAKQLLIDPEDDVR
DNILKYDEEGGGEEDQDYDLSQLQQPDALEPECIKVGIRRLDERPLHHDHQYPIRSAAPH
PGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSDAGSLSSLHSSSSCGDQDYDYLG
DWGPRFRKLADLYGGGDD
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcatcttttggggatttggatgctgatggcggctctgcagctggttgctctgggcaga
gaggccgagcgctcgtcgtcaggcgagcaggggtcgttgccgtgcacgaggggcttcact
caggaggactacgtcatcgaagtggaccgggagctggcaaagggacaggctgtcttcaac
gtgagcttcacggactgcggtagaaggaaggtgtggttccaggttagcgactcatctgat
ttcggggtgagtgaggacggtgcggtctacgccctgcgccgcctcagcctggtgggaagt
ggaaaagctgtggaggtggtgtacgcccaagacccgcagtccaaacaggtctggaagacc
agagtgcacctcctcgtccgtccaaacggcaacagcgcaggacttgaacaggtgaagcac
agtgatgcaacactgactcagcgggtaccagagatcttgtttccatggcgcagcgtggtt
gtcaggggcgatggcactctgaggcgggtgaagagggactgggtcattccgcccatcaac
gtccccgagaactcacgaggacagttccccgaggagcttgtcagaatccgctcggaccgg
gataataaccggttgctacggtacagtgtgacgggtcccggggccgaccagcccccgacc
agcatcttcatcatcagcccaatctcgggccagctgtccgtcaccaagcctttggacaga
gagcatatctccaacttccatctgcgagcccacgcggtggacctgaatggaaatcaggtg
gagaaccccatcgacatcgtcatcaacgtcatcgaccagaacgacaacagaccagagttc
acgcacaccatcttcaacggctctgtacccgagggatccaagcctggatcctttgtgatg
acggtgacatccgtggataaggatgatccaaaaactgcaaatgggatgctgcgatacaag
attctctcccagaatccccagagcccctcctccaacatgttcactattaacaacaagacg
ggtgacatcatcaccgtggcagcgggcctagatcgggagaaagtcacccagtacactctg
atcatccaggccacggacatggaggggaaccccacgtacggcctgtccaacaccgccacc
actgtcatcaggatcactgacgtcaacgacaacccgcctgagttcaccaccgacacattc
ttcggggaggtccatgagaacagagtgaacgtcatcgtggcgaacctgaccgtgacggat
aaagaccagccgcacacatcagcatggagcgccgtgtaccgcatcatcgccggggacccc
accggacgcttctccatccccaccgaccacaccaccaacgaaggcctgctcactgtggtc
aagcccatagactttgagctgacccgctccttcatgctgacggtggaggcagagaacgag
gtcccgctggcccgtggaatccacctgccgcggcagtccacggcgaccgtctccgtgcgg
atcctggacgtcaacgagagtcccgagttcagccccaatcccaaatccatcaaactggag
gagggtctgcccgcggggtcactgctcaccaccttcactgcccaggaccccgaccgcttc
ttgagacaaactgtccggtactccaagatgtacgaccccgctaactggctggagattgac
cccgttaatggtcgcatttccaccatcgccatccttgaccgagagtctccctacgtcaag
aacaacctctacaacgtcacattcatggcctctgataacggtatccctcctgccagcggg
acaggcacccttcagatgtacctgctggacataaatgacaatgcacctcacgtgttcccc
cctgaggtggaaatgtgtgagaagcctgatccgaacgccatcaacatcacagccagtgac
cccgacctgaccccgaacgcgggacccttcgctttcgagctggccaatcggccatcagat
gtacgccgcaactggacgctgaatcgcatcaatggcgagtatgcccagctgagactgagg
atcggctccctggctagtgggatctacgaggttcccatcatgatcacagactccggtaac
ctgcccatgtccaacacgtcctacctgagagtcaaggtctgccagtgtgatcaccatggc
gactgtgtggacatggagcggatcatcgccgctggactgggtaccggaaccatcatcgcc
atcctcatctgcatcatcatactattagtgctggtgctgctgtttgtcatgtggatgaag
aggagggacaaggagcgtcaggccaagcagctcctcatcgacccagaggacgacgtgcga
gacaacatcctgaaatatgacgaggaggggggaggagaggaggaccaggactacgacctg
agtcagctgcagcagcccgacgccctggagccagagtgcatcaaggtggggatcagacgt
ctggatgagaggcctctccaccatgaccaccagtaccccatccgctctgccgccccccac
ccaggagacatcggagacttcatccacgagggcctgaaggcagcggacaacgaccccact
gcccccccctacgactccctgctggtgttcgactacgagggcagcggctccgacgccggc
tccctcagctccctgcactcctcctcgagctgcggcgaccaggactacgactatctcggc
gactgggggccgcgcttccgcaagctggccgacctgtacggcggaggggacgactag

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