Cyclopterus lumpus (lumpfish): 117729594
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Entry
117729594 CDS
T09199
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117729594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117729594
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117729594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADIP
Ribosomal_L30_N
ZapA
Motif
Other DBs
NCBI-GeneID:
117729594
NCBI-ProteinID:
XP_034386712
Ensembl:
ENSCLMG00005022297
LinkDB
All DBs
Position
4:complement(17831731..17838160)
Genome browser
AA seq
588 aa
AA seq
DB search
MPESSLGFISPEVKDTCSSSVECRSPPLIQFSQSSVPLHRNYILSTFCTEHNVQECLSHI
NQEVSSLGLPPVWTESSGSSEMNVMAVLNCMYDLIQLHHRGLRTLENMEVEQLKSSSNVD
HLQRTSTQLKEQLELSKRGNTGLLERERQLHLKVKSLQNCLKNEKDEVQKLQNIIASRAS
QYNHEMKRKEREFTKLKERLNQLLVDKKEKKQAIDVLNNIGRADGKRSLWKTQKTEAKHE
GEMYKTLLSDYDTRQREMLLENAELKKVLQQIKKEMVSILSLRKPIRKDDKHPDAGIQAD
SEDEEQVFDSSKESVGLFSVHAREKLTNSIRLQWRRLKSHVERLDSQASLAQMGENKTDD
AISRETHEEEMDRLKLEIQPCKDFIQTQQQLLQQQLSSPCDEETTSLLSNCYMLQERERF
REEWKTLEKQRNLFERERRNCTEAAIRLSHERKAFEDDRAVWLKHQFLNLSPFADLRKPQ
MSKSKSCFLISETESSASSAPEKLIKCRSDTTSPTPRCVPLTSASTADMHRTVCLVPEKR
STKPNGKTDHVEESRLFCNGNVPEQHEQWNNREDHSSQTLLMESTCSI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgccagagtcctcccttgggtttatttccccagaagtcaaggacacttgcagcagctct
gttgaatgtagatcgcctcccttgatacagtttagccaatcatcggtgccgctgcacaga
aactacattctcagtaccttctgcacagagcacaatgtgcaggaatgtctatcacacatc
aatcaggaggtgtcatctcttggcctcccaccggtttggacggagtcgagcggcagctca
gagatgaatgttatggctgtactaaattgcatgtacgacctgattcagctgcaccacagg
ggcctccggaccctggaaaacatggaagtggaacagctgaagtccagcagcaatgtggat
cacctgcagcgcacgagcactcaactaaaagagcaacttgaactgtccaaaagagggaac
acaggacttcttgagagagaacgacagctgcatttgaaagtaaagagtttgcagaactgc
ctgaaaaatgaaaaagatgaggtgcaaaaacttcagaacataattgcaagtcgggccagc
cagtacaatcatgagatgaaaaggaaagagagagaatttaccaaactgaaggagcgcttg
aatcaacttctggttgacaaaaaggagaagaagcaagctattgatgtattaaacaacatt
ggaagagctgatgggaagagaagcctttggaaaactcaaaagacagaagcaaagcatgag
ggggagatgtataagaccctgctgagcgactatgacacccgacaaagggagatgctgctg
gaaaatgcagagttgaagaaagtgttgcagcagataaaaaaagaaatggtgtccattctg
agtttaaggaaaccaattcggaaagatgacaaacatccagatgctggcattcaggctgac
tcggaggatgaagagcaagtgtttgattccagtaaagaaagtgtcgggctgtttagtgtt
cacgcccgcgagaagctgaccaacagtattcgcctccagtggagaagactcaagagccac
gttgaacgattggacagccaagcctctttagctcagatgggcgagaacaaaaccgatgat
gccatatcccgagagactcatgaggaggagatggacagactgaagctggagatccagccg
tgcaaagacttcattcaaacacaacagcagctcctgcagcagcagctgagctctccatgt
gatgaggagaccacatccctgttgagcaactgctacatgctgcaggagagagagcgcttc
agagaggagtggaagaccctcgagaaacagaggaatctcttcgagagggagaggaggaac
tgcactgaagcagctataaggcttagccatgagaggaaggcctttgaggacgatcgagca
gtgtggctcaaacaccagtttttaaacttgagtccatttgctgacttaaggaaaccacag
atgtcaaagtctaaaagttgttttttaatatctgaaacagagtcaagtgcatcgtcggct
ccagagaagctcatcaaatgccggtctgacacaacctcccccacacccagatgtgtcccc
ctcacatcagcatcaacagcagacatgcatcgcacagtttgccttgtgccagaaaaaaga
tcaaccaaaccaaatggaaagactgaccatgttgaagaatcaaggcttttttgtaatgga
aatgttccagagcagcacgaacagtggaacaaccgtgaagaccacagcagccaaacactc
ttaatggaaagcacctgctctatatga
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