Cyclopterus lumpus (lumpfish): 117729648
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Entry
117729648 CDS
T09199
Symbol
elavl4
Name
(RefSeq) LOW QUALITY PROTEIN: ELAV-like protein 4
KO
K13208
ELAV like protein 2/3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117729648 (elavl4)
03041 Spliceosome [BR:
clum03041
]
117729648 (elavl4)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117729648 (elavl4)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117729648 (elavl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
Motif
Other DBs
NCBI-GeneID:
117729648
NCBI-ProteinID:
XP_034386812
Ensembl:
ENSCLMG00005012884
LinkDB
All DBs
Position
4:complement(19617959..19684011)
Genome browser
AA seq
469 aa
AA seq
DB search
MFEISRTLNAALLSNEHLKMMARYGQLSGLAASGVGSVPETHSPLFPRDLLSSPAQMGYR
SPLGSTETQWRQAELPQLQGWAEKGLLTQPKMIISNMDAPVTNGPSGGGTTANGPTANSR
GCPSPMQTGQSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGY
GFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELE
QLFSQYGRIITSRILVDQVTEACVCFXSAGPAGGSRGVGFIRFDKRIEAEEAIKGLNGQK
PTGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVK
RFSPITIDSMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRD
FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaataagccgaaccctaaacgccgctttgttgagcaatgagcatctcaagatg
atggcgaggtacgggcagctctcgggactagcagccagtggcgtgggctccgtccccgag
acgcactcgccgctatttcccagggatctcctgtcatcgccagcccagatgggctacagg
tcacccctggggtcgacagagacacagtggcgtcaggcagagctcccacagctccagggc
tgggcagagaagggattgctgacacagccaaagatgatcatcagtaacatggatgctcca
gtgacaaatgggcccagcggaggaggcaccacagccaacgggccgaccgccaacagccgc
ggctgtccctcgcccatgcagaccggccaatcaaatgacgacagcaagaccaacctcatc
gtcaactacctgccgcagaacatgacccaggaggagttccgcagcctgtttggtagcatc
ggcgagattgagtcctgcaagctggtccgcgacaagatcacaggacagagtctgggctac
ggctttgtcaactacatcgatccaaaggacgcagagaaagccatcaacacgttaaatgga
ctcagacttcagaccaaaacgatcaaggtgtcatatgcacgacccagttcagcctccatc
cgtgatgccaacctgtatgtgagtggcctgcccaagacgatgactcagaaggagctggag
cagctcttctcccagtacggacgcatcatcacctcccgcatcctcgtcgaccaggtcaca
gaggcctgtgtttgtttttgatctgctggccccgcaggtggctcccgaggtgtgggcttc
atccgctttgataagaggatagaggctgaggaggccatcaagggcctgaacggacagaag
ccaacaggggccgccgagcccataacggtcaagttcgccaacaaccccagccagaagacc
agccaagccctcctctcacaactctaccagtcccccaatcgccgatacccgggccccctc
caccaccaggctcagaggttcaggctggacaatttgcttaatatggcctatggcgtaaag
aggttctcccccatcaccattgacagcatgaccagcctggttggcatgaacatccctggg
cacacgggcactggctggtgcatcttcgtgtacaacctgtcgccagattcggatgagagc
gtgctctggcagctgttcgggcccttcggtgcagtcaacaacgtcaaggtgatccgtgac
ttcaacaccaacaagtgcaaaggcttcggctttgtcaccatgacaaattacgacgaggcg
gccatggccatcgccagtctcaacggctacaggttgggcgaccgcgtcttgcaagtctcc
ttcaagactaacaagacacacaagtcctga
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