Cyclopterus lumpus (lumpfish): 117729666
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Entry
117729666 CDS
T09199
Symbol
rx1
Name
(RefSeq) retinal homeobox protein Rx1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117729666 (rx1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117729666 (rx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117729666
NCBI-ProteinID:
XP_034386841
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All DBs
Position
4:18981218..18989589
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AA seq
357 aa
AA seq
DB search
MHLSLDTMSMVDDSCLSPGNFHEMGKGGGVAVGGRVHSIDVILGFSKDQDPLLSPAGAPR
PHKVDVDDLAEPGRQQQEPSSHLAYSGHLSSLRNGSTEQQQQYHDTGFFTNKCDEELSEL
RKSVESDEGKSPEPCKDEMPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMK
VNLPEVRVQVWFQNRRAKWRRQEKMDASTMKLHDSPMLSFNRPPPVHTSMGAMTNSLPLD
PWLSSPLSSATPVHSIPGFMGPAQGLQPSYPSHSFLNSTPHPPHPHPHPHPPHPHSHPHP
SMGQGMQSMAPPPYQCSAPYPDKYPLEDVDQRSSSIAVLRMKAKEHLQSMDKTWHPM
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcactggacaccatgagcatggtggacgacagctgcctgtcacccggcaac
ttccacgagatggggaaaggtgggggcgtcgctgtggggggccgcgtccacagcatcgat
gtcattctgggtttcagtaaagaccaggaccccctgctcagccctgctggagccccgcga
ccccacaaagttgacgtagatgacctggcagagcctgggaggcagcagcaggaaccctca
tcacacctggcctacagcgggcacctttcctctctgagaaatggcagcacggagcagcag
cagcagtaccacgataccggctttttcacaaacaagtgtgacgaggagctgagtgaactg
aggaagagtgtagagagcgatgaaggcaagtctccagagccatgcaaggacgagatgccc
aagaagaagcacaggcgcaaccgcaccaccttcaccacctaccagctgcacgagctggag
cgtgccttcgagaagtcccactacccggacgtgtacagccgcgaggagctcgccatgaag
gtcaacctcccagaagtccgagttcaggtctggttccagaaccgcagagctaaatggcgt
cggcaggaaaaaatggatgccagcaccatgaagctccacgactcgccgatgctttccttt
aaccgcccgccaccggttcataccagcatgggtgcgatgaccaactccctccccttggac
ccctggctctcctctcccctgtctagcgccacaccggtccacagcatcccaggcttcatg
ggtccagctcagggcctccagcccagctaccccagccacagcttcctcaactctactcct
catccgcctcatcctcatcctcatcctcatcctcctcatcctcactctcatcctcatccg
tccatgggccaggggatgcagagtatggctcctcctccctaccagtgctcagcaccgtac
cctgataaatatcctctggaggacgtggaccagcgcagctctagtatcgctgtgctgaga
atgaaagccaaggaacatctccaatctatggacaagacctggcatcccatgtga
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integrated database retrieval system
