KEGG   Cyclopterus lumpus (lumpfish): 117729669
Entry
117729669         CDS       T09199                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117729669 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117729669 (aptx)
Enzymes [BR:clum01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     117729669 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     117729669 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     117729669 (aptx)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117729669 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117729669 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4
Other DBs
NCBI-GeneID: 117729669
NCBI-ProteinID: XP_034386849
Ensembl: ENSCLMG00005005461
UniProt: A0A8C2WVS1
LinkDB
Position
1:complement(16280136..16283168)
AA seq 333 aa
MPICWLTSDEGSHKPIRLPHQQTVVLGRGPETTIKDQKCSRQQVELKAECNKGYVKVKQL
GLNPTSIDSVVVGKDNEVKMKAGQLLHIVNQLYPYTVQFKEDPTGDHGGTKRPREPSSAD
RERRREEQSVKAAKRTEKVSVSVSLGEATKSSESFGHWSQGLKTSMQDPKMQVYKDDKVV
VIKDKYPKARYHWLVLPWQTISSLTAFTEEHCDLVKHMQQVADQMVRQCPDAGSLRFRTG
YHAIPSMSHIHLHVISQDFDSPCLKNKKHWNSFTTDYFMESHDVIQMLETNGRVNVKEGT
SELLKLPLRCHMCRKDIPTIPALKEHLKSHFPS
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccgatttgctggctcaccagtgatgagggtagtcataaacccattcgactgccacac
caacagacagttgtcctgggtcgaggtccagagacgactattaaagaccaaaaatgctct
cggcagcaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagttaaacagctg
ggcttgaaccccacctccatagattctgtggtggtgggtaaggacaatgaggtaaaaatg
aaagctggacagctgcttcatattgtcaaccagctctacccatacactgtacagttcaag
gaggatcccaccggggaccacggcggcactaaaagaccacgagagccgtcttcagcagac
agagagcgccgcagagaggagcagagtgtgaaagcagccaaacggacagaaaaggtctct
gtgtcagtcagccttggagaagccacaaaaagcagtgaaagttttggacattggagccaa
ggtctgaagacatcaatgcaagacccaaagatgcaggtatacaaggatgacaaggtagtg
gttatcaaagataaataccccaaagctcgctaccactggctggtcctcccgtggcagacc
atttccagcctgacggccttcactgaggagcactgcgatctggtgaaacacatgcagcaa
gttgctgaccagatggttcggcagtgcccagatgctggctcgctacgtttccgtactggg
taccatgccatccctagtatgagtcatatacacctccatgtgatcagccaagactttgac
tctccttgtttaaagaacaaaaagcattggaactcatttacaactgactatttcatggag
tctcatgatgtcattcagatgcttgaaacgaatggaagagtcaatgtgaaagaaggaacc
agcgagttgttgaaactacctctccgctgtcacatgtgccgcaaagatattcccactata
ccagctctgaaggagcacctaaagtctcactttcccagctaa

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